Implementation of the Rapid Polymyxin™ NP test directly to positive blood cultures bottles

Diagn Microbiol Infect Dis. 2019 Dec;95(4):114889. doi: 10.1016/j.diagmicrobio.2019.114889. Epub 2019 Aug 23.

Abstract

The present study assessed the performance of Rapid Polymyxin™ NP test to detect colistin resistance directly from 132 blood cultures found positive for Enterobacterales by FilmArray. Additionally, colistin MICs of isolated microorganisms were determined by the commercial broth microdilution method ComASP™ Colistin, used as the gold standard comparator. The Rapid Polymyxin™ NP test correctly detected all colistin-resistant isolates. However, the test has misidentified as resistant 4 colistin-susceptible isolates (1 Escherichia coli and 3 Klebsiella pneumoniae). Molecular characterization of colistin-resistant isolates showed that K. pneumoniae, which belonged to ST15 and ST147, carried alterations in the mgrB. Moreover, the first Greek mcr-1-positive colistin-resistant E. coli was detected. The rapidity (2-3 h) of the results, combined with its excellent negative predictive value (100%), allows implementation of the test for routine testing of blood cultures mainly in the clinical settings that are endemic for carbapenem-resistant bacteria, avoiding misuse of colistin and preventing the spread of colistin-resistant bacteria.

Keywords: Colistin-resistant; Enterobacterales; Escherichia coli; IncX4; Klebsiella pneumoniae; mcr-positive.

MeSH terms

  • Anti-Bacterial Agents / pharmacology*
  • Bacterial Proteins / genetics
  • Blood Culture / instrumentation*
  • Colistin / pharmacology*
  • Diagnostic Tests, Routine / methods*
  • Drug Resistance, Bacterial / drug effects*
  • Drug Resistance, Bacterial / genetics
  • Enterobacteriaceae / drug effects
  • Enterobacteriaceae / genetics
  • Enterobacteriaceae / isolation & purification
  • Enterobacteriaceae Infections / microbiology
  • Escherichia coli / drug effects
  • Escherichia coli / genetics
  • Escherichia coli / isolation & purification
  • False Positive Reactions
  • Greece
  • Humans
  • Klebsiella pneumoniae / drug effects
  • Klebsiella pneumoniae / genetics
  • Klebsiella pneumoniae / isolation & purification
  • Microbial Sensitivity Tests / methods*

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Colistin