Automatic classification of lung nodule candidates based on a novel 3D convolution network and knowledge transferred from a 2D network

Med Phys. 2019 Dec;46(12):5499-5513. doi: 10.1002/mp.13867. Epub 2019 Nov 6.

Abstract

Objective: In the automatic lung nodule detection system, the authenticity of a large number of nodule candidates needs to be judged, which is a classification task. However, the variable shapes and sizes of the lung nodules have posed a great challenge to the classification of candidates. To solve this problem, we propose a method for classifying nodule candidates through three-dimensional (3D) convolution neural network (ConvNet) model which is trained by transferring knowledge from a multiresolution two-dimensional (2D) ConvNet model.

Methods: In this scheme, a novel 3D ConvNet model is preweighted with the weights of the trained 2D ConvNet model, and then the 3D ConvNet model is trained with 3D image volumes. In this way, the knowledge transfer method can make 3D network easier to converge and make full use of the spatial information of nodules with different sizes and shapes to improve the classification accuracy.

Results: The experimental results on 551 065 pulmonary nodule candidates in the LUNA16 dataset show that our method gains a competitive average score in the false-positive reduction track in lung nodule detection, with the sensitivities of 0.619 and 0.642 at 0.125 and 0.25 FPs per scan, respectively.

Conclusions: The proposed method can maintain satisfactory classification accuracy even when the false-positive rate is extremely small in the face of nodules of different sizes and shapes. Moreover, as a transfer learning idea, the method to transfer knowledge from 2D ConvNet to 3D ConvNet is the first attempt to carry out full migration of parameters of various layers including convolution layers, full connection layers, and classifier between different dimensional models, which is more conducive to utilizing the existing 2D ConvNet resources and generalizing transfer learning schemes.

Keywords: 2D network; 3D convolutional neural network; automatic classification; knowledge transfer; lung nodule candidates.

MeSH terms

  • Automation
  • Image Processing, Computer-Assisted / methods*
  • Knowledge Bases*
  • Lung Neoplasms / diagnostic imaging*
  • Neural Networks, Computer*
  • Sensitivity and Specificity
  • Tomography, X-Ray Computed