Flammeovirga pectinis sp. nov., isolated from the gut of the Korean scallop, Patinopecten yessoensis

Int J Syst Evol Microbiol. 2020 Jan;70(1):499-504. doi: 10.1099/ijsem.0.003783.

Abstract

A novel Gram-stain-negative, aerobic, rod-shaped, reddish-orange-coloured, gliding bacterial strain, designated L12M1T, was isolated from the gut of the Korean scallop, Patinopecten yessoensis. Phylogenetic analysis based on 16S rRNA gene sequence revealed that strain L12M1T formed a monophyletic clade with the strains in the genus Flammeovirga and showed highest 16S rRNA gene sequence similarity to Flammeovirga kamogawensis YS10T (98.66 %). The major cellular fatty acids of strain L12M1T were iso-C15 : 0 and C20 : 4ω6,9,12,15c. The predominant isoprenoid quinone was MK-7. The major polyamines were spermidine, cadaverine and the minor polyamine was putrescine. The DNA G+C content was 32.1 mol%. The phylogenetic, phenotypic, biochemical, chemotaxonomic and genotypic results indicated that strain L12M1T represents a novel species of the genus Flammeovirga, for which the name Flammeovirga pectinis sp. nov. is proposed. The type strain is L12M1T (=KCTC 62750T=JCM 33169T).

Keywords: Flammeovirga; Flammeovirgaceae; Patinopecten yessoensis.

MeSH terms

  • Animals
  • Bacterial Typing Techniques
  • Bacteroidetes / classification*
  • Bacteroidetes / isolation & purification
  • Base Composition
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Pectinidae / microbiology*
  • Phylogeny*
  • Pigmentation
  • Polyamines / chemistry
  • RNA, Ribosomal, 16S / genetics
  • Republic of Korea
  • Sequence Analysis, DNA
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Polyamines
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 7