Selective Inhibitors of AlkB Family of Nucleic Acid Demethylases

Biochemistry. 2020 Jan 28;59(3):230-239. doi: 10.1021/acs.biochem.9b00774. Epub 2019 Oct 28.

Abstract

The α-ketoglutarate-dependent (AlkB) superfamily of FeII/2-oxoglutarate (2-OG)-dependent dioxygenases consists of a unique class of nucleic acid repair enzymes that reversibly remove alkyl substituents from nucleobases through oxidative dealkylation. Recent studies have verified the involvement of AlkB dioxygenases in a variety of human diseases. However, the development of small organic molecules that can function as enzyme inhibitors to block the action of oxidative dealkylation is still in its infancy. These purposeful chemical motifs, if capable of influencing the dealkylation activity, would have a potential clinical value by controlling genetic information expression. In this Perspective, we will summarize some of the most updated inhibitors of AlkB family demethylases and hope to provide a thought for the follow-up screening optimization.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • AlkB Enzymes / antagonists & inhibitors
  • AlkB Enzymes / chemistry
  • AlkB Enzymes / genetics*
  • DNA Damage / drug effects
  • DNA Methylation / drug effects
  • DNA Repair / drug effects
  • Enzyme Inhibitors / pharmacology*
  • Gene Expression Regulation / drug effects
  • Humans
  • Ketoglutarate Dehydrogenase Complex / antagonists & inhibitors
  • Ketoglutarate Dehydrogenase Complex / genetics*
  • Ketoglutaric Acids / antagonists & inhibitors

Substances

  • Enzyme Inhibitors
  • Ketoglutaric Acids
  • AlkB Enzymes
  • Ketoglutarate Dehydrogenase Complex