miR2Diabetes: A Literature-Curated Database of microRNA Expression Patterns, in Diabetic Microvascular Complications

Genes (Basel). 2019 Oct 9;10(10):784. doi: 10.3390/genes10100784.

Abstract

microRNAs (miRNAs) have been established as critical regulators of the pathogenesis of diabetes mellitus (DM), and diabetes microvascular complications (DMCs). However, manually curated databases for miRNAs, and DM (including DMCs) association studies, have yet to be established. Here, we constructed a user-friendly database, "miR2Diabetes," equipped with a graphical web interface for simple browsing or searching manually curated annotations. The annotations in our database cover 14 DM and DMC phenotypes, involving 156 miRNAs, by browsing diverse sample origins (e.g., blood, kidney, liver, and other tissues). Additionally, we provide miRNA annotations for disease-model organisms (including rats and mice), of DM and DMCs, for the purpose of improving knowledge of the biological complexity of these pathologies. We assert that our database will be a comprehensive resource for miRNA biomarker studies, as well as for prioritizing miRNAs for functional validation, in DM and DMCs, with likely extension to other diseases.

Keywords: databases; diabetes mellitus; diabetic microvascular complications; miRNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Data Curation / methods
  • Databases, Nucleic Acid
  • Diabetes Complications / genetics*
  • Diabetes Mellitus / genetics
  • Disease Models, Animal
  • Gene Expression / genetics
  • Humans
  • Mice
  • MicroRNAs / genetics*
  • Microvessels / metabolism*
  • Rats
  • Software
  • Transcriptome / genetics
  • User-Computer Interface

Substances

  • MicroRNAs