Optimizing the intrinsic parallel diffusivity in NODDI: An extensive empirical evaluation

PLoS One. 2019 Sep 25;14(9):e0217118. doi: 10.1371/journal.pone.0217118. eCollection 2019.

Abstract

Purpose: NODDI is widely used in parameterizing microstructural brain properties. The model includes three signal compartments: intracellular, extracellular, and free water. The neurite compartment intrinsic parallel diffusivity (d∥) is set to 1.7 μm2⋅ms-1, though the effects of this assumption have not been extensively explored. This work investigates the optimality of d∥ = 1.7 μm2⋅ms-1 under varying imaging protocol, age groups, sex, and tissue type in comparison to other biologically plausible values of d∥.

Methods: Model residuals were used as the optimality criterion. The model residuals were evaluated in function of d∥ over the range from 0.5 to 3.0 μm2⋅ms-1. This was done with respect to tissue type (i.e., white matter versus gray matter), sex, age (infancy to late adulthood), and diffusion-weighting protocol (maximum b-value). Variation in the estimated parameters with respect to d∥ was also explored.

Results: Results show d∥ = 1.7 μm2⋅ms-1 is appropriate for adult brain white matter but it is suboptimal for gray matter with optimal values being significantly lower. d∥ = 1.7 μm2⋅ms-1 was also suboptimal in the infant brain for both white and gray matter with optimal values being significantly lower. Minor optimum d∥ differences were observed versus diffusion protocol. No significant sex effects were observed. Additionally, changes in d∥ resulted in significant changes to the estimated NODDI parameters.

Conclusion: The default (d∥) of 1.7 μm2⋅ms-1 is suboptimal in gray matter and infant brains.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Adolescent
  • Adult
  • Age Factors
  • Aged
  • Brain / diagnostic imaging*
  • Brain / physiology*
  • Child
  • Child, Preschool
  • Diffusion Magnetic Resonance Imaging* / methods
  • Diffusion Magnetic Resonance Imaging* / standards
  • Female
  • Functional Neuroimaging* / methods
  • Functional Neuroimaging* / standards
  • Gray Matter / diagnostic imaging
  • Gray Matter / physiology
  • Humans
  • Image Processing, Computer-Assisted
  • Infant
  • Infant, Newborn
  • Male
  • Middle Aged
  • Sex Factors
  • White Matter / diagnostic imaging
  • White Matter / physiology
  • Young Adult

Associated data

  • figshare/10.6084/m9.figshare.9747704