A novel robust kernel principal component analysis for nonlinear statistical shape modeling from erroneous data

Comput Med Imaging Graph. 2019 Oct:77:101638. doi: 10.1016/j.compmedimag.2019.05.006. Epub 2019 Sep 21.

Abstract

Statistical Shape Models (SSMs) have achieved considerable success in medical image segmentation. A high quality SSM is able to approximate the main plausible variances of a given anatomical structure to guide segmentation. However, it is technically challenging to derive such a quality model because: (1) the distribution of shape variance is often nonlinear or multi-modal which cannot be modeled by standard approaches assuming Gaussian distribution; (2) as the quality of annotations in training data usually varies, heavy corruption will degrade the quality of the model as a whole. In this work, these challenges are addressed by introducing a generic SSM that is able to model nonlinear distribution and is robust to outliers in training data. Without losing generality and assuming a sparsity in nonlinear distribution, a novel Robust Kernel Principal Component Analysis (RKPCA) for statistical shape modeling is proposed with the aim of constructing a low-rank nonlinear subspace where outliers are discarded. The proposed approach is validated on two different datasets: a set of 30 public CT kidney pairs and a set of 49 MRI ankle bones volumes. Experimental results demonstrate a significantly better performance on outlier recovery and a higher quality of the proposed model as well as lower segmentation errors compared to the state-of-the-art techniques.

Keywords: Data corruption; Robust Kernel principal component analysis; Segmentation; Statistical shape model.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ankle / diagnostic imaging
  • Datasets as Topic
  • Humans
  • Kidney / diagnostic imaging
  • Magnetic Resonance Imaging
  • Models, Statistical*
  • Principal Component Analysis*
  • Tomography, X-Ray Computed