Nipped-A regulates the Drosophila circadian clock via histone deubiquitination

EMBO J. 2020 Jan 2;39(1):e101259. doi: 10.15252/embj.2018101259. Epub 2019 Sep 19.

Abstract

Psychiatric diseases are often accompanied by circadian disruptions, but the molecular underpinnings remain largely unclear. To address this, we screened genes that have been previously reported to be associated with psychiatric diseases and found that TRRAP, a gene associated with schizophrenia, is involved in circadian rhythm regulation. Knocking down Nipped-A, the Drosophila homolog of human TRRAP, leads to lengthened period of locomotor rhythms in flies. Molecular analysis demonstrates that NIPPED-A sets the pace of the clock by increasing the mRNA and protein levels of core clock genes timeless (tim) and Par domain protein 1ε (Pdp1ε). Furthermore, we found that NIPPED-A promotes the transcription of tim and Pdp1ε possibly by facilitating deubiquitination of histone H2B via the deubiquitination module of the transcription co-activator Spt-Ada-Gcn5 acetyltransferase complex. Taken together, these findings reveal a novel role for NIPPED-A in epigenetic regulation of the clock.

Keywords: Drosophila; NIPPED-A; circadian clock; histone deubiquitination.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Basic-Leucine Zipper Transcription Factors / genetics
  • Basic-Leucine Zipper Transcription Factors / metabolism*
  • Circadian Clocks*
  • Deubiquitinating Enzymes / genetics
  • Deubiquitinating Enzymes / metabolism*
  • Drosophila Proteins / genetics
  • Drosophila Proteins / metabolism*
  • Drosophila melanogaster / physiology*
  • Epigenesis, Genetic
  • Histones / genetics
  • Histones / metabolism*
  • Male
  • Protein Processing, Post-Translational
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*
  • Ubiquitination

Substances

  • Basic-Leucine Zipper Transcription Factors
  • Drosophila Proteins
  • Histones
  • NIPPED-A protein, Drosophila
  • PDP1 protein, Drosophila
  • Transcription Factors
  • tim protein, Drosophila
  • Deubiquitinating Enzymes