Overall Shape Constraint of Alternating α/β-Hybrid Peptides Containing Bicyclic β-Proline

Org Lett. 2019 Oct 4;21(19):7813-7817. doi: 10.1021/acs.orglett.9b02799. Epub 2019 Sep 13.

Abstract

Our NMR, IR/Raman, CD spectroscopic, and X-ray crystallographic studies, as well as accelerated molecular dynamics simulations, showed that alternating hybrid α/β-peptides containing a bicyclic β-proline surrogate form unique extended curved folds, regardless of the peptide length and solvent environment. It is suggested that extended β/PPII structures are preferred in the insulating α-alanine moieties between the rigid bicyclic β-proline structures. These hybrid peptides inhibit p53-MDM2 and p53-MDMX protein-protein interactions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell Cycle Proteins / antagonists & inhibitors
  • Cell Cycle Proteins / chemistry
  • Crystallography, X-Ray
  • Humans
  • Molecular Dynamics Simulation
  • Peptides / chemistry*
  • Peptides / pharmacology
  • Proline / analogs & derivatives*
  • Proline / chemistry
  • Proline / pharmacology
  • Protein Binding / drug effects
  • Protein Structure, Secondary
  • Proto-Oncogene Proteins / antagonists & inhibitors
  • Proto-Oncogene Proteins / chemistry
  • Proto-Oncogene Proteins c-mdm2 / antagonists & inhibitors
  • Proto-Oncogene Proteins c-mdm2 / chemistry
  • Tumor Suppressor Protein p53 / antagonists & inhibitors
  • Tumor Suppressor Protein p53 / chemistry

Substances

  • Cell Cycle Proteins
  • MDM4 protein, human
  • Peptides
  • Proto-Oncogene Proteins
  • Tumor Suppressor Protein p53
  • Proline
  • Proto-Oncogene Proteins c-mdm2
  • beta-proline