Structure-function insights into elusive Mycobacterium tuberculosis protein Rv1916

Int J Biol Macromol. 2019 Dec 1:141:927-936. doi: 10.1016/j.ijbiomac.2019.09.038. Epub 2019 Sep 7.

Abstract

Tuberculosis (TB) is one of the leading causes of death worldwide. Long duration of TB therapy, results in the persistence and development of drug resistant strains of causative organism Mycobacterium tuberculosis (Mtb). Novel drug targets against persistent Mtb is an immediate need for overcoming this global menace. Isocitrate lyase (ICL), the first enzyme of glyoxylate pathway, is essential for persistent Mtb and absent in humans, hence a propitious target for drug development. Pathogenic Mtb H37Rv, have two types of ICLs - ICL1 encoded by icl (Rv0467) is well characterized and homologous to eubacterial enzyme whereas ICL2 encoded by aceA is more related to eukaryotic isocitrate lyase. To compound it, the aceA gene is split into two ORFs namely rv1915/aceAa and rv1916/aceAb. No translational product has been reported for the later and therefore, in vivo existence of Rv1916/ICL2b is debatable. This study reports recombinant production of Rv1916 in heterologous host E. coli BL21 (DE3) for structure function studies. The studies categorically demonstrate that akin to Mtb ICL1, recombinant Rv1916 also possess dual ICL and methylisocitrate lyase (MICL) activities in vitro. Based on in silico analysis, a putative function linked to secondary metabolite synthesis is assigned to unique mycobacterial domain IV.

Keywords: Bioinformatics; Catalytic activity; Cloning; Isocitrate lyase; Methylisocitrate lyase; Phylogenetic analysis; Purification; Rv0467.

MeSH terms

  • Amino Acid Sequence
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Bacterial Proteins / metabolism
  • Isocitrate Lyase / chemistry*
  • Isocitrate Lyase / genetics
  • Isocitrate Lyase / isolation & purification
  • Isocitrate Lyase / metabolism
  • Kinetics
  • Models, Molecular*
  • Mycobacterium tuberculosis / classification
  • Mycobacterium tuberculosis / enzymology*
  • Mycobacterium tuberculosis / genetics
  • Phylogeny
  • Protein Conformation*
  • Quantitative Structure-Activity Relationship
  • Recombinant Proteins

Substances

  • Bacterial Proteins
  • Recombinant Proteins
  • icl protein, Mycobacterium
  • Isocitrate Lyase