Focused size selection of cell-free DNA samples for liquid biopsy applications that rely on next-generation sequencing

Biotechniques. 2019 Oct;67(4):188-191. doi: 10.2144/btn-2019-0071. Epub 2019 Sep 10.

Abstract

Genomic analysis of circulating, cell-free DNA (cfDNA) is being used extensively for molecular diagnostics. Many approaches rely on the construction of cfDNA genomic libraries, targeted retrieval of specific genomic regions and analysis by next-generation DNA sequencing. Several steps during sample preparation require isolation of DNA fragments within a particular size range. In this Benchmark article, two related methods for size-selective DNA fragment enrichment are described.

Keywords: DNA purification; SPRI beads; cell-free DNA; liquid biopsy; next-generation sequencing.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cell-Free Nucleic Acids / chemistry
  • Cell-Free Nucleic Acids / isolation & purification*
  • High-Throughput Nucleotide Sequencing* / methods
  • Humans
  • Liquid Biopsy*

Substances

  • Cell-Free Nucleic Acids