Synthesis of Cyclobutane Analogue 4: Preparation of Purine and Pyrimidine Carbocyclic Nucleoside Derivatives

Molecules. 2019 Sep 5;24(18):3235. doi: 10.3390/molecules24183235.

Abstract

The coupling of 2-bromo-3-benzoyloxycyclobutanone with purine under basic conditions produces two regioisomers consisting of the N-7 and N-9 alkylated products in equal amounts in their racemic forms. The distribution of the isomers is consistent with the charge delocalization between the N-7 and N-9 positions of the purinyl anion. The structural assignments and relative stereochemistry of each regioisomer were based on 1 and 2D NMR techniques. The relative stereochemistry of the C-2 and C-3 substituents in each regioisomer was the trans orientation consistent with steric factors in the coupling step. The N-9 regioisomer was reduced with sodium borohydride to give the all trans cyclobutanol as the major product in a stereoselective manner. The alcohol was debenzoylated with sodium methoxide in a transesterification step to give the nucleoside analogue. The regioisomeric pyrimidine nucleosides were prepared by Vorbrüggen coupling of the 3-hydroxymethylcyclobutanone triflate with either thymine or uracil followed by stereoselective hydride addition. Regiospecificity of the coupling at the N-1 position was observed and stereoselective reduction to the trans-disubstituted cyclobutanol structure assignments was based on NMR data.

Keywords: cyclobutanes; nucleoside analogs; purine; thymine; uracil.

MeSH terms

  • Chemistry Techniques, Synthetic
  • Cyclobutanes / chemical synthesis*
  • Cyclobutanes / chemistry
  • Magnetic Resonance Spectroscopy
  • Molecular Structure
  • Purines / chemistry
  • Pyrimidine Nucleosides / chemistry
  • Stereoisomerism

Substances

  • Cyclobutanes
  • Purines
  • Pyrimidine Nucleosides
  • purine