Structure of GTP cyclohydrolase I from Listeria monocytogenes, a potential anti-infective drug target

Acta Crystallogr F Struct Biol Commun. 2019 Sep 1;75(Pt 9):586-592. doi: 10.1107/S2053230X19010902. Epub 2019 Aug 30.

Abstract

A putative open reading frame encoding GTP cyclohydrolase I from Listeria monocytogenes was expressed in a recombinant Escherichia coli strain. The recombinant protein was purified and was confirmed to convert GTP to dihydroneopterin triphosphate (Km = 53 µM; vmax = 180 nmol mg-1 min-1). The protein was crystallized from 1.3 M sodium citrate pH 7.3 and the crystal structure was solved at a resolution of 2.4 Å (Rfree = 0.226) by molecular replacement using human GTP cyclohydrolase I as a template. The protein is a D5-symmetric decamer with ten topologically equivalent active sites. Screening a small library of about 9000 compounds afforded several inhibitors with IC50 values in the low-micromolar range. Several inhibitors had significant selectivity with regard to human GTP cyclohydrolase I. Hence, GTP cyclohydrolase I may be a potential target for novel drugs directed at microbial infections, including listeriosis, a rare disease with high mortality.

Keywords: GTP cyclohydrolase I; Listeria monocytogenes; crystal structure; high-throughput screening; listeriosis; tetrahydrofolate biosynthesis.

MeSH terms

  • Anti-Bacterial Agents / pharmacology
  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / isolation & purification
  • Crystallography, X-Ray
  • Escherichia coli / metabolism
  • GTP Cyclohydrolase / antagonists & inhibitors
  • GTP Cyclohydrolase / chemistry*
  • GTP Cyclohydrolase / genetics
  • GTP Cyclohydrolase / isolation & purification
  • Listeria monocytogenes / enzymology*
  • Listeria monocytogenes / genetics
  • Neopterin / analogs & derivatives
  • Neopterin / metabolism
  • Protein Conformation
  • Recombinant Proteins / metabolism
  • Small Molecule Libraries / chemistry
  • Small Molecule Libraries / pharmacology

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Recombinant Proteins
  • Small Molecule Libraries
  • dihydroneopterin triphosphate
  • Neopterin
  • GTP Cyclohydrolase

Grants and funding

This work was funded by Deutsche Forschungsgemeinschaft grant . Hans-Fischer-Gesellschaft grant .