Crystal structure of TchmY from Actinoplanes teichomyceticus

Acta Crystallogr F Struct Biol Commun. 2019 Sep 1;75(Pt 9):570-575. doi: 10.1107/S2053230X19010914. Epub 2019 Aug 28.

Abstract

Moenomycin-type antibiotics are phosphoglycolipids that are notable for their unique modes of action and have proven to be useful in animal nutrition. The gene clusters tchm from Actinoplanes teichomyceticus and moe from Streptomyces are among a limited number of known moenomycin-biosynthetic pathways. Most genes in tchm have counterparts in the moe cluster, except for tchmy and tchmz, the functions of which remain unknown. Sequence analysis indicates that TchmY belongs to the isoprenoid enzyme C2-like superfamily and may serve as a prenylcyclase. The enzyme was proposed to be involved in terminal cyclization of the moenocinyl chain in teichomycin, leading to the diumycinol chain of moenomycin isomers. Here, recombinant TchmY protein was expressed in Escherichia coli and its crystal structure was solved by SIRAS. Structural analysis and comparison with other prenylcyclases were performed. The overall fold of TchmY consists of an (α/α)6-barrel, and a potential substrate-binding pocket is found in the central chamber. These results should provide important information regarding the biosynthetic basis of moenomycin antibiotics.

Keywords: Actinoplanes teichomyceticus; crystal structure; prenylcyclases.

MeSH terms

  • Actinoplanes / enzymology*
  • Actinoplanes / genetics
  • Alkyl and Aryl Transferases / chemistry
  • Anti-Bacterial Agents / chemistry
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / genetics
  • Bacterial Proteins / metabolism
  • Crystallography, X-Ray
  • Escherichia coli / genetics
  • Gene Expression Regulation, Bacterial
  • Multigene Family
  • Oligosaccharides / chemistry
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism
  • Teicoplanin / biosynthesis*
  • Teicoplanin / chemistry

Substances

  • Anti-Bacterial Agents
  • Bacterial Proteins
  • Oligosaccharides
  • Recombinant Proteins
  • Teicoplanin
  • Alkyl and Aryl Transferases
  • terpene synthase
  • moenomycin