Algorithm for distance list extraction from pair distribution functions

Acta Crystallogr A Found Adv. 2019 Sep 1;75(Pt 5):658-668. doi: 10.1107/S2053273319008647. Epub 2019 Aug 12.

Abstract

An algorithm is presented to extract the distance list from atomic pair distribution functions in a highly automated way. The algorithm is constructed via curve fitting based on a Debye scattering equation model. Because of the non-convex nature of the resulting optimization problem, a number of techniques are developed to overcome various computational difficulties. A key ingredient is a new approach to obtain a reasonable initial guess based on the theoretical properties of the mathematical model. Tests on various nanostructured samples show the effectiveness of the initial guess and the accuracy and overall good performance of the extraction algorithm. This approach could be extended to any spectrum that is approximated as a sum of Gaussian functions.

Keywords: Debye scattering equation; curve fitting; distance list; pair distribution function; peak extraction.