Practical Guidelines for 13C-Based NMR Metabolomics

Methods Mol Biol. 2019:2037:69-95. doi: 10.1007/978-1-4939-9690-2_5.

Abstract

We present an overview of 13C-based NMR metabolomics. At first glance, the low sensitivity of 13C relative to 1H NMR might seem like too great an obstacle to use this approach. However, there are several advantages to 13C NMR, whether samples can be isotopically enriched or not. At natural abundance, peaks are sharp and largely resolved, and peak frequencies are more stable to pH and other sample conditions. Statistical approaches can be used to obtain C-C and C-H correlation maps, which greatly aid in compound identification. With 13C isotopic enrichment, other experiments are possible, including both 13C-J-RES and INADEQUATE, which can be used for de novo identification of metabolites not in databases.NMR instrumentation and software has significantly improved, and probes are now commercially available that can record useful natural abundance 1D 13C spectra from real metabolomics samples in 2 h or less. Probe technology continues to improve, and the next generation should be even better. Combined with new methods of simultaneous data acquisition, which allows for two or more 1D or 2D NMR experiments to be collected using multiple receivers, very rich datasets can be collected in a reasonable amount of time that should improve metabolomics data analysis and compound identification.

Keywords: 13C J-RES; 13C NMR detection; INADEQUATE; Isotopic labeling; Metabolomics; Multiple receivers; Natural abundance 13C; PANACEA; Parallel NMR; Simultaneous acquisition.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Carbon Isotopes / analysis*
  • Databases, Factual
  • Guidelines as Topic*
  • Humans
  • Magnetic Resonance Spectroscopy / methods*
  • Metabolomics / methods*
  • Software*

Substances

  • Carbon Isotopes