2-D magnetic resonance spectroscopic imaging of the pediatric brain using compressed sensing

Pediatr Radiol. 2019 Dec;49(13):1798-1808. doi: 10.1007/s00247-019-04495-1. Epub 2019 Aug 28.

Abstract

Background: Magnetic resonance spectroscopic imaging helps to determine abnormal brain tissue conditions by evaluating metabolite concentrations. Although a powerful technique, it is underutilized in routine clinical studies because of its long scan times.

Objective: In this study, we evaluated the feasibility of scan time reduction in metabolic imaging using compressed-sensing-based MR spectroscopic imaging in pediatric patients undergoing routine brain exams.

Materials and methods: We retrospectively evaluated compressed-sensing reconstructions in MR spectroscopic imaging datasets from 20 pediatric patients (11 males, 9 females; average age: 5.4±4.5 years; age range: 3 days to 16 years). We performed retrospective under-sampling of the MR spectroscopic imaging datasets to simulate accelerations of 2-, 3-, 4-, 5-, 7- and 10-fold, with subsequent reconstructions in MATLAB. Metabolite maps of N-acetylaspartate, creatine, choline and lactate (where applicable) were quantitatively evaluated in terms of the root-mean-square error (RMSE), peak amplitudes and total scan time. We used the two-tailed paired t-test along with linear regression analysis to statistically compare the compressed-sensing reconstructions at each acceleration with the fully sampled reference dataset.

Results: High fidelity was maintained in the compressed-sensing MR spectroscopic imaging reconstructions from 50% to 80% under-sampling, with the RMSE not exceeding 3% in any dataset. Metabolite intensities and ratios evaluated on a voxel-by-voxel basis showed no statistically significant differences and mean metabolite intensities showed high correlation compared to the fully sampled reference dataset up to an acceleration factor of 5.

Conclusion: Compressed-sensing MR spectroscopic imaging has the potential to reduce MR spectroscopic imaging scan times for pediatric patients, with negligible information loss.

Keywords: Brain; Children; Choline; Compressed sensing; Creatine; Lactate; Magnetic resonance spectroscopic imaging; N-acetylaspartate.

MeSH terms

  • Adolescent
  • Age Factors
  • Aspartic Acid / analogs & derivatives
  • Aspartic Acid / metabolism
  • Brain Diseases / diagnostic imaging
  • Brain Diseases / pathology
  • Brain Neoplasms / diagnostic imaging*
  • Brain Neoplasms / pathology
  • Child
  • Child, Preschool
  • Cohort Studies
  • Databases, Factual
  • Female
  • Humans
  • Image Interpretation, Computer-Assisted / methods*
  • Infant
  • Infant, Newborn
  • Magnetic Resonance Spectroscopy / methods*
  • Male
  • Radiation Exposure / prevention & control*
  • Retrospective Studies
  • Risk Assessment
  • Seizures / diagnostic imaging*
  • Seizures / pathology
  • Sensitivity and Specificity
  • Sex Factors
  • Time Factors

Substances

  • Aspartic Acid
  • N-acetylaspartate