Computational and experimental elucidation of Plasmodium falciparum phosphoethanolamine methyltransferase inhibitors: Pivotal drug target

PLoS One. 2019 Aug 22;14(8):e0221032. doi: 10.1371/journal.pone.0221032. eCollection 2019.

Abstract

Introduction: Plasmodium falciparum synthesizes phosphatidylcholine for the membrane development through serine decarboxylase-phosphoethanolamine methyltransferase pathway for growth in human host. Phosphoethanolamine-methyltransferase (PfPMT) is a crucial enzyme for the synthesis of phosphocholine which is a precursor for phosphatidylcholine synthesis and is considered as a pivotal drug target as it is absent in the host. The inhibition of PfPMT may kill malaria parasite and hence is being considered as potential target for rational antimalarial drug designing.

Methods: In this study, we have used computer aided drug designing (CADD) approaches to establish potential PfPMT inhibitors from Asinex compound library virtually screened for ADMET and the docking affinity. The selected compounds were tested for in-vitro schizonticidal, gametocidal and cytotoxicity activity. Nontoxic compounds were further studied for PfPMT enzyme specificity and antimalarial efficacy for P. berghei in albino mice model.

Results: Our results have identified two nontoxic PfPMT competitive inhibitors ASN.1 and ASN.3 with better schizonticidal and gametocidal activity which were found to inhibit PfPMT at IC50 1.49μM and 2.31μM respectively. The promising reduction in parasitaemia was found both in orally (50 & 10 mg/kg) and intravenous (IV) (5& 1 mg/kg) however, the better growth inhibition was found in intravenous groups.

Conclusion: We report that the compounds containing Pyridinyl-Pyrimidine and Phenyl-Furan scaffolds as the potential inhibitors of PfPMT and thus may act as promising antimalarial inhibitor candidates which can be further optimized and used as leads for template based antimalarial drug development.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Administration, Oral
  • Amino Acid Sequence
  • Animals
  • Antimalarials / chemical synthesis*
  • Antimalarials / pharmacology
  • Binding Sites
  • Drug Design
  • Enzyme Inhibitors / chemical synthesis*
  • Enzyme Inhibitors / pharmacology
  • Furans / chemical synthesis
  • Furans / pharmacology
  • Injections, Intravenous
  • Malaria / drug therapy*
  • Malaria / parasitology
  • Male
  • Methyltransferases / antagonists & inhibitors*
  • Methyltransferases / chemistry
  • Methyltransferases / metabolism
  • Mice
  • Molecular Docking Simulation
  • Parasitic Sensitivity Tests
  • Phosphatidylcholines / antagonists & inhibitors
  • Phosphatidylcholines / biosynthesis
  • Plasmodium berghei / drug effects*
  • Plasmodium berghei / enzymology
  • Plasmodium berghei / growth & development
  • Plasmodium falciparum / drug effects*
  • Plasmodium falciparum / enzymology
  • Plasmodium falciparum / growth & development
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Protein Structure, Secondary
  • Protozoan Proteins / antagonists & inhibitors*
  • Protozoan Proteins / chemistry
  • Protozoan Proteins / metabolism
  • Pyridines / chemical synthesis
  • Pyridines / pharmacology
  • Pyrimidines / chemical synthesis
  • Pyrimidines / pharmacology
  • Sequence Alignment
  • Sequence Homology, Amino Acid
  • Small Molecule Libraries / chemistry
  • Small Molecule Libraries / pharmacology

Substances

  • Antimalarials
  • Enzyme Inhibitors
  • Furans
  • Phosphatidylcholines
  • Protozoan Proteins
  • Pyridines
  • Pyrimidines
  • Small Molecule Libraries
  • Methyltransferases
  • phosphoethanolamine methyltransferase

Grants and funding

Study was funded by NIMR through Intramural grant (Id: NIMR/PB/2015/310) from NIMR, Dwarka sector-8(ICMR). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.