Genetic factors contributing to autism spectrum disorder in Williams-Beuren syndrome

J Med Genet. 2019 Dec;56(12):801-808. doi: 10.1136/jmedgenet-2019-106080. Epub 2019 Aug 14.

Abstract

Background: The hallmark of the neurobehavioural phenotype of Williams-Beuren syndrome (WBS) is increased sociability and relatively preserved language skills, often described as opposite to autism spectrum disorders (ASD). However, the prevalence of ASD in WBS is 6-10 times higher than in the general population. We have investigated the genetic factors that could contribute to the ASD phenotype in individuals with WBS.

Methods: We studied four males and four females with WBS and a confirmed diagnosis of ASD by the Autism Diagnostic Interview-Revised. We performed a detailed molecular characterisation of the deletion and searched for genomic variants using exome sequencing.

Results: A de novo deletion of 1.55 Mb (6 cases) or 1.83 Mb (2 cases) at 7q11.23 was detected, being in 7/8 patients of paternal origin. No common breakpoint, deletion mechanism or size was found. Two cases were hemizygous for the rare T allele at rs12539160 in MLXIPL, previously associated with ASD. Inherited rare variants in ASD-related or functionally constrained genes and a de novo nonsense mutation in the UBR5 gene were identified in six cases, with higher burden in females compared with males (p=0.016).

Conclusions: The increased susceptibility to ASD in patients with WBS might be due to additive effects of the common WBS deletion, inherited and de novo rare sequence variants in ASD-related genes elsewhere in the genome, with higher burden of deleterious mutations required for females, and possible hypomorphic variants in the hemizygous allele or cis-acting mechanisms on imprinting.

Keywords: Williams-Beuren syndrome; autism spectrum disorders; comorbidity; exome sequencing; neurobehavioural phenotype.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Autism Spectrum Disorder / genetics*
  • Autism Spectrum Disorder / pathology
  • Basic Helix-Loop-Helix Leucine Zipper Transcription Factors / genetics*
  • Child
  • Child, Preschool
  • Chromosome Deletion
  • Exome Sequencing
  • Female
  • Genetic Predisposition to Disease
  • Genome, Human / genetics
  • Hemizygote
  • Humans
  • Infant
  • Male
  • Phenotype
  • Ubiquitin-Protein Ligases / genetics*
  • Williams Syndrome / genetics*
  • Williams Syndrome / pathology

Substances

  • Basic Helix-Loop-Helix Leucine Zipper Transcription Factors
  • MLXIPL protein, human
  • UBR5 protein, human
  • Ubiquitin-Protein Ligases