Ternary structure of the outer membrane transporter FoxA with resolved signalling domain provides insights into TonB-mediated siderophore uptake

Elife. 2019 Aug 6:8:e48528. doi: 10.7554/eLife.48528.

Abstract

Many microbes and fungi acquire the essential ion Fe3+ through the synthesis and secretion of high-affinity chelators termed siderophores. In Gram-negative bacteria, these ferric-siderophore complexes are actively taken up using highly specific TonB-dependent transporters (TBDTs) located in the outer bacterial membrane (OM). However, the detailed mechanism of how the inner-membrane protein TonB connects to the transporters in the OM as well as the interplay between siderophore- and TonB-binding to the transporter is still poorly understood. Here, we present three crystal structures of the TBDT FoxA from Pseudomonas aeruginosa (containing a signalling domain) in complex with the siderophore ferrioxamine B and TonB and combine them with a detailed analysis of binding constants. The structures show that both siderophore and TonB-binding is required to form a translocation-competent state of the FoxA transporter in a two-step TonB-binding mechanism. The complex structure also indicates how TonB-binding influences the orientation of the signalling domain.

Keywords: E. coli; TonB-dependent transporter; crystal structure; integral membrane protein; molecular biophysics; siderophore uptake; structural biology.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacterial Outer Membrane Proteins / chemistry*
  • Bacterial Outer Membrane Proteins / metabolism*
  • Bacterial Proteins / chemistry*
  • Bacterial Proteins / metabolism*
  • Biological Transport
  • Deferoxamine / chemistry*
  • Deferoxamine / metabolism*
  • Ferric Compounds / chemistry*
  • Ferric Compounds / metabolism*
  • Iron Chelating Agents / chemistry
  • Iron Chelating Agents / metabolism
  • Membrane Proteins / chemistry*
  • Membrane Proteins / metabolism*
  • Protein Structure, Quaternary
  • Pseudomonas aeruginosa / enzymology*
  • Receptors, Cell Surface / chemistry*
  • Receptors, Cell Surface / metabolism*

Substances

  • Bacterial Outer Membrane Proteins
  • Bacterial Proteins
  • Ferric Compounds
  • FoxA protein, bacteria
  • Iron Chelating Agents
  • Membrane Proteins
  • Receptors, Cell Surface
  • tonB protein, Bacteria
  • ferrioxamine B
  • Deferoxamine

Associated data

  • PDB/6I97
  • PDB/6I98