A Long Noncoding RNA, Antisense IL-7, Promotes Inflammatory Gene Transcription through Facilitating Histone Acetylation and Switch/Sucrose Nonfermentable Chromatin Remodeling

J Immunol. 2019 Sep 15;203(6):1548-1559. doi: 10.4049/jimmunol.1900256. Epub 2019 Aug 5.

Abstract

Long noncoding RNAs are important regulators of gene expression in innate immune responses. Antisense IL-7 (IL-7-AS) is a newly discovered long noncoding RNA in human and mouse that has been reported to regulate the expression of IL-6. However, the potential function of IL-7-AS in innate immune system is not fully understood. In this study, we found that the expression of IL-7-AS is primarily dependent on the NF-κB and MAPK signaling pathways in macrophages and intestinal epithelial cells. Functionally, IL-7-AS promotes the expression of several inflammatory genes, including CCL2, CCL5, CCL7, and IL-6, in cells in response to LPS. Specifically, IL-7-AS physically interacts with p300 to regulate histone acetylation levels around the promoter regions of these gene loci. Moreover, IL-7-AS and p300 complex modulate the assembly of SWI/SNF complex to the promoters. IL-7-AS regulates chemotaxis activity of monocytes to intestine epithelial cells with involvement of CCL2. Therefore, our data indicate a new promoting role for NF-κB/MAPK-responsive IL-7-AS in the transcriptional regulation of inflammatory genes in the innate immune system although modulation of histone acetylation around the promoters of related genes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Acetylation
  • Animals
  • Cell Line
  • Cell Line, Tumor
  • Chromatin Assembly and Disassembly / genetics*
  • Female
  • HEK293 Cells
  • Histones / genetics*
  • Humans
  • Immunity, Innate / genetics
  • Inflammation / genetics*
  • Interleukin-7 / genetics*
  • Mice
  • Mice, Inbred BALB C
  • Mice, Inbred C57BL
  • Promoter Regions, Genetic / genetics
  • RAW 264.7 Cells
  • RNA, Long Noncoding / genetics*
  • Signal Transduction / genetics
  • Transcription, Genetic / genetics*
  • U937 Cells

Substances

  • Histones
  • Interleukin-7
  • RNA, Long Noncoding