Biochemical and structural explorations of α-hydroxyacid oxidases reveal a four-electron oxidative decarboxylation reaction

Acta Crystallogr D Struct Biol. 2019 Aug 1;75(Pt 8):733-742. doi: 10.1107/S2059798319009574. Epub 2019 Jul 30.

Abstract

p-Hydroxymandelate oxidase (Hmo) is a flavin mononucleotide (FMN)-dependent enzyme that oxidizes mandelate to benzoylformate. How the FMN-dependent oxidation is executed by Hmo remains unclear at the molecular level. A continuum of snapshots from crystal structures of Hmo and its mutants in complex with physiological/nonphysiological substrates, products and inhibitors provides a rationale for its substrate enantioselectivity/promiscuity, its active-site geometry/reactivity and its direct hydride-transfer mechanism. A single mutant, Y128F, that extends the two-electron oxidation reaction to a four-electron oxidative decarboxylation reaction was unexpectedly observed. Biochemical and structural approaches, including biochemistry, kinetics, stable isotope labeling and X-ray crystallography, were exploited to reach these conclusions and provide additional insights.

Keywords: flavin mononucleotide; hydride transfer; mandelate oxidase; oxidative decarboxylation; α-hydroxyacids.

MeSH terms

  • Alcohol Oxidoreductases / chemistry*
  • Alcohol Oxidoreductases / genetics
  • Binding Sites
  • Cloning, Molecular / methods
  • Crystallography, X-Ray / methods
  • Decarboxylation
  • Escherichia coli / genetics
  • Flavin Mononucleotide / metabolism*
  • Kinetics
  • Mandelic Acids / metabolism*
  • Mutagenesis, Site-Directed
  • Oxidation-Reduction
  • Protein Binding
  • Substrate Specificity

Substances

  • Mandelic Acids
  • Flavin Mononucleotide
  • Alcohol Oxidoreductases
  • glycollate oxidase
  • mandelic acid