Design, synthesis and antimycobacterial activity of benzoxazinone derivatives and open-ring analogues: Preliminary data and computational analysis

Bioorg Med Chem Lett. 2019 Sep 1;29(17):2468-2474. doi: 10.1016/j.bmcl.2019.07.025. Epub 2019 Jul 17.

Abstract

This study examines in depth benzoxazine nucleus for antimycobacterial property. We synthesized some benzoxazin-2-one and benzoxazin-3-one derivatives, which were tested for activity against a panel of Mycobacterium tuberculosis (Mtb) strains, including H37Ra, H37Rv and some resistant strains. Several compounds displayed a high antimycobacterial activity and the three isoniazid analogue derivatives 8a-c exhibited a MIC range of 0.125-0.250 μg/mL (0.37-0.75 μM) against strain H37Ra, therefore lower than the isoniazid reference drug. Two benzoxazin-2-one derivatives, 1c and 5j, together with isoniazid-analogue compound 8a, also revealed low MIC values against resistant strains and proved highly selective for mycobacterial cells, compared to mammalian Vero cells. To predict whether molecule 8a is able to interact with the active site of InhA, we docked it into the crystal structure; indeed, during the molecular dynamic simulation the compound never left the protein pocket. The more active compounds were predicted for ADME properties and all proved to be potentially orally active in humans.

Keywords: ADME; Antimycobacterial activity; Benzoxazinone; Molecular dynamics; Oxoacetamide.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Antitubercular Agents / chemical synthesis*
  • Antitubercular Agents / pharmacology
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Benzoxazines / chemistry*
  • Benzoxazines / pharmacology
  • Binding Sites
  • Catalytic Domain
  • Chlorocebus aethiops
  • Drug Design*
  • Drug Resistance, Bacterial / drug effects
  • Isoniazid / pharmacology
  • Microbial Sensitivity Tests
  • Molecular Docking Simulation
  • Mycobacterium tuberculosis / drug effects
  • Oxidoreductases / chemistry
  • Oxidoreductases / metabolism
  • Structure-Activity Relationship
  • Vero Cells

Substances

  • Antitubercular Agents
  • Bacterial Proteins
  • Benzoxazines
  • Oxidoreductases
  • InhA protein, Mycobacterium
  • Isoniazid