The final steps of [FeFe]-hydrogenase maturation

Proc Natl Acad Sci U S A. 2019 Aug 6;116(32):15802-15810. doi: 10.1073/pnas.1908121116. Epub 2019 Jul 23.

Abstract

The active site (H-cluster) of [FeFe]-hydrogenases is a blueprint for the design of a biologically inspired H2-producing catalyst. The maturation process describes the preassembly and uptake of the unique [2FeH] cluster into apo-hydrogenase, which is to date not fully understood. In this study, we targeted individual amino acids by site-directed mutagenesis in the [FeFe]-hydrogenase CpI of Clostridium pasteurianum to reveal the final steps of H-cluster maturation occurring within apo-hydrogenase. We identified putative key positions for cofactor uptake and the subsequent structural reorganization that stabilizes the [2FeH] cofactor in its functional coordination sphere. Our results suggest that functional integration of the negatively charged [2FeH] precursor requires the positive charges and individual structural features of the 2 basic residues of arginine 449 and lysine 358, which mark the entrance and terminus of the maturation channel, respectively. The results obtained for 5 glycine-to-histidine exchange variants within a flexible loop region provide compelling evidence that the glycine residues function as hinge positions in the refolding process, which closes the secondary ligand sphere of the [2FeH] cofactor and the maturation channel. The conserved structural motifs investigated here shed light on the interplay between the secondary ligand sphere and catalytic cofactor.

Keywords: catalyst; hydrogenase; maturation; organometallic cofactor; redox enzymes.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apoproteins / chemistry
  • Apoproteins / metabolism
  • Bacterial Proteins / chemistry
  • Bacterial Proteins / metabolism
  • Clostridium / enzymology
  • Electrochemistry
  • Holoenzymes / chemistry
  • Holoenzymes / metabolism
  • Hydrogen / metabolism
  • Hydrogenase / chemistry
  • Hydrogenase / metabolism*
  • Iron / metabolism*
  • Models, Molecular
  • Spectroscopy, Fourier Transform Infrared

Substances

  • Apoproteins
  • Bacterial Proteins
  • Holoenzymes
  • Hydrogen
  • Iron
  • Hydrogenase