Sirtuin 7 promotes 45S pre-rRNA cleavage at site 2 and determines the processing pathway

J Cell Sci. 2019 Sep 2;132(17):jcs228601. doi: 10.1242/jcs.228601.

Abstract

In humans, ribosome biogenesis mainly occurs in nucleoli following two alternative pre-rRNA processing pathways differing in the order in which cleavages take place but not by the sites of cleavage. To uncover the role of the nucleolar NAD+-dependent deacetylase sirtuin 7 in the synthesis of ribosomal subunits, pre-rRNA processing was analyzed after sirtinol-mediated inhibition of sirtuin 7 activity or depletion of sirtuin 7 protein. We thus reveal that sirtuin 7 activity is a critical regulator of processing of 45S, 32S and 30S pre-rRNAs. Sirtuin 7 protein is primarily essential to 45S pre-rRNA cleavage at site 2, which is the first step of processing pathway 2. Furthermore, we demonstrate that sirtuin 7 physically interacts with Nop56 and the GAR domain of fibrillarin, and propose that this could interfere with fibrillarin-dependent cleavage. Sirtuin 7 depletion results in the accumulation of 5' extended forms of 32S pre-rRNA, and also influences the localization of fibrillarin. Thus, we establish a close relationship between sirtuin 7 and fibrillarin, which might determine the processing pathway used for ribosome biogenesis.

Keywords: Deacetylase; Nucleolus; Pre-rRNA processing; Ribosome; SIRT7; Sirtinol.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Benzamides / pharmacology
  • Catalytic Domain
  • Chromosomal Proteins, Non-Histone / deficiency
  • Chromosomal Proteins, Non-Histone / metabolism
  • HEK293 Cells
  • HeLa Cells
  • Humans
  • Naphthols / pharmacology
  • Nuclear Proteins / metabolism
  • Organelle Biogenesis
  • RNA, Ribosomal / metabolism*
  • RNA, Small Interfering / administration & dosage
  • RNA, Small Interfering / genetics
  • Ribosomes / metabolism
  • Sirtuins / antagonists & inhibitors
  • Sirtuins / genetics
  • Sirtuins / metabolism*

Substances

  • Benzamides
  • Chromosomal Proteins, Non-Histone
  • NOP56 protein, human
  • Naphthols
  • Nuclear Proteins
  • RNA, Ribosomal
  • RNA, Small Interfering
  • RNA, ribosomal, 45S
  • SIRT7 protein, human
  • fibrillarin
  • sirtinol
  • Sirtuins