The transcription factor odd-paired regulates temporal identity in transit-amplifying neural progenitors via an incoherent feed-forward loop

Elife. 2019 Jul 22:8:e46566. doi: 10.7554/eLife.46566.

Abstract

Neural progenitors undergo temporal patterning to generate diverse neurons in a chronological order. This process is well-studied in the developing Drosophila brain and conserved in mammals. During larval stages, intermediate neural progenitors (INPs) serially express Dichaete (D), grainyhead (Grh) and eyeless (Ey/Pax6), but how the transitions are regulated is not precisely understood. Here, we developed a method to isolate transcriptomes of INPs in their distinct temporal states to identify a complete set of temporal patterning factors. Our analysis identifies odd-paired (opa), as a key regulator of temporal patterning. Temporal patterning is initiated when the SWI/SNF complex component Osa induces D and its repressor Opa at the same time but with distinct kinetics. Then, high Opa levels repress D to allow Grh transcription and progress to the next temporal state. We propose that Osa and its target genes opa and D form an incoherent feedforward loop (FFL) and a new mechanism allowing the successive expression of temporal identities.

Keywords: D. melanogaster; developmental biology; neural progenitor; neuroscience; temporal identity; transcription factors.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Body Patterning
  • Brain / embryology*
  • DNA-Binding Proteins / metabolism*
  • Drosophila / embryology*
  • Drosophila Proteins / metabolism*
  • Gene Expression Profiling
  • Gene Expression Regulation, Developmental*
  • Homeodomain Proteins / metabolism*
  • Neural Stem Cells / physiology*
  • SOX Transcription Factors / metabolism*
  • Transcription Factors / metabolism*

Substances

  • D protein, Drosophila
  • DNA-Binding Proteins
  • Drosophila Proteins
  • Homeodomain Proteins
  • Opa protein, Drosophila
  • SOX Transcription Factors
  • Transcription Factors
  • osa protein, Drosophila