Exploring the strength of a hydrogen bond as a function of steric environment using 1,2-azaborine ligands and engineered T4 lysozyme receptors

Org Biomol Chem. 2019 Aug 7;17(29):7002-7006. doi: 10.1039/c9ob01008d. Epub 2019 Jul 16.

Abstract

A congeneric series of 1,2-azaborine ligands was used to study the relationship between the steric demand of the ligand and hydrogen bonding strength in the context of ligand-protein binding using engineered T4 lysozymes as the model biomacromolecules. The hydrogen bonding strength values were extracted from experimentally accessible binding free energies using the Double Mutant Cycle analysis. With the increasing steric demand, the NH…102Q hydrogen bonding interaction is weakened; however, this weakening of the hydrogen bonding interaction occurs in discrete steps rather than in an incremental fashion.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacteriophage T4 / enzymology*
  • Boron Compounds / chemistry*
  • Hydrogen Bonding
  • Ligands
  • Molecular Structure
  • Muramidase / chemistry*
  • Muramidase / genetics
  • Muramidase / metabolism
  • Protein Engineering*
  • Thermodynamics

Substances

  • 1,2-azaborine
  • Boron Compounds
  • Ligands
  • Muramidase