Evaluation of GALNT16 polymorphisms to breast cancer risk in Chinese population

Mol Genet Genomic Med. 2019 Aug;7(8):e848. doi: 10.1002/mgg3.848. Epub 2019 Jul 8.

Abstract

Background: Polypeptide N-acetylgalactosaminyltransferase 16 (GALNT16) is an N-acetylgalactosaminyltransferase gene that alters protein O-glycosylation, which plays a role in tumor development. This study aims to explore the association of eight GALNT16 polymorphisms with susceptibility to breast cancer (BC).

Methods: This case-control study included 563 BC patients and 552 age-matched healthy controls from the Chinese Han population. The genotypes of GALNT16 polymorphisms were detected using the Agena MassARRAY. The relationship between GALNT16 polymorphisms and BC risk was evaluated using a chi-squared test with an odds ratio (OR) and 95% confidence intervals (CI) under five genetic models.

Results: We observed that rs2105269 and rs72625676 were associated with higher BC risk in younger patients with age ≤51 (rs2105269, codominant: p = .006; recessive: p = .005 additive: p = .018; and allele: p = .012; rs72625676, codominant: p = .038; recessive: p = .037). For rs1275678 polymorphism, there was a significantly decreased risk of BC among elder patients (codominant: p = .017; dominant: p = .019; additive: p = .030; and allele: p = .029). Further analysis by clinical characteristics showed rs2105269 was associated with tumor size and lymph node metastasis.

Conclusion: Our study suggests that GALNT16 polymorphisms are associated with BC susceptibility in Chinese population.

Keywords: GALNT16; breast cancer; polymorphism; susceptibility.

Publication types

  • Observational Study
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alleles
  • Asian People / genetics*
  • Breast / pathology
  • Breast Neoplasms / blood
  • Breast Neoplasms / genetics*
  • Breast Neoplasms / pathology
  • Case-Control Studies
  • Female
  • Genetic Predisposition to Disease*
  • Humans
  • Lymphatic Metastasis / genetics*
  • Middle Aged
  • N-Acetylgalactosaminyltransferases / genetics*
  • Polymorphism, Single Nucleotide
  • Polypeptide N-acetylgalactosaminyltransferase
  • Tumor Burden / genetics

Substances

  • GALNT16 protein, human
  • N-Acetylgalactosaminyltransferases