Structural characterization of Treponema pallidum Tp0225 reveals an unexpected leucine-rich repeat architecture

Acta Crystallogr F Struct Biol Commun. 2019 Jul 1;75(Pt 7):489-495. doi: 10.1107/S2053230X19007726. Epub 2019 Jun 26.

Abstract

The phylogenetically divergent spirochete bacterium Treponema pallidum subsp. pallidum is the causative agent of syphilis. Central to the capacity of T. pallidum to establish infection is the ability of the pathogen to attach to a diversity of host cells. Many pathogenic bacteria employ leucine-rich repeat (LRR) domain-containing proteins to mediate protein-protein interactions, including attachment to host components and establishment of infection. Intriguingly, T. pallidum expresses only one putative LRR domain-containing protein (Tp0225) with an unknown function. In an effort to ascribe a function to Tp0225, a comprehensive phylogenetic analysis was first performed; this investigation revealed that Tp0225 clusters with the pathogenic clade of treponemes. Its crystal structure was then determined to 2.0 Å resolution using Pt SAD phasing, which revealed a noncanonical architecture containing a hexameric LRR core with a discontinuous β-sheet bridged by solvent molecules. Furthermore, a surface-exposed, hydrophobic pocket, which was found in Tp0225 but is largely absent in canonical LRR domains from other pathogenic bacteria, may serve to coordinate a hydrophobic ligand. Overall, this study provides the first structural characterization of the sole LRR domain-containing protein from T. pallidum and offers insight into the unique molecular landscape of this important human pathogen.

Keywords: Treponema pallidum; X-ray crystallography; leucine rich-repeat domain; syphilis.

MeSH terms

  • Bacterial Proteins / chemistry*
  • Binding Sites
  • Crystallography, X-Ray
  • Hydrophobic and Hydrophilic Interactions
  • Leucine-Rich Repeat Proteins
  • Phylogeny
  • Protein Domains
  • Protein Structure, Secondary
  • Proteins / chemistry*
  • Treponema pallidum / metabolism*

Substances

  • Bacterial Proteins
  • Leucine-Rich Repeat Proteins
  • Proteins