Identification of a basal system for unwinding a bacterial chromosome origin

EMBO J. 2019 Aug 1;38(15):e101649. doi: 10.15252/embj.2019101649. Epub 2019 Jun 27.

Abstract

Genome duplication is essential for cell proliferation, and DNA synthesis is generally initiated by dedicated replication proteins at specific loci termed origins. In bacteria, the master initiator DnaA binds the chromosome origin (oriC) and unwinds the DNA duplex to permit helicase loading. However, despite decades of research it remained unclear how the information encoded within oriC guides DnaA-dependent strand separation. To address this fundamental question, we took a systematic genetic approach in vivo and identified the core set of essential sequence elements within the Bacillus subtilis chromosome origin unwinding region. Using this information, we then show in vitro that the minimal replication origin sequence elements are necessary and sufficient to promote the mechanical functions of DNA duplex unwinding by DnaA. Because the basal DNA unwinding system characterized here appears to be conserved throughout the bacterial domain, this discovery provides a framework for understanding oriC architecture, activity, regulation and diversity.

Keywords: DNA replication; DnaA; origin; unwinding.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Bacillus subtilis / genetics*
  • Bacterial Proteins / metabolism
  • Chromosomes, Bacterial / genetics*
  • DNA Helicases / metabolism
  • DNA Replication
  • DNA-Binding Proteins / metabolism
  • Origin Recognition Complex / metabolism
  • Replication Origin*

Substances

  • Bacterial Proteins
  • DNA-Binding Proteins
  • DnaA protein, Bacteria
  • OriC chromosomal replication origin
  • Origin Recognition Complex
  • DNA Helicases