High-Throughput Production of Oxidized Animal Toxins in Escherichia coli

Methods Mol Biol. 2019:2025:165-190. doi: 10.1007/978-1-4939-9624-7_7.

Abstract

High-throughput production (HTP) of synthetic genes is becoming an important tool to explore the biological function of the extensive genomic and meta-genomic information currently available from various sources. One such source is animal venom, which contains thousands of novel bioactive peptides with potential uses as novel therapeutics to treat a plethora of diseases as well as in environmentally benign bioinsecticide formulations. Here, we describe a HTP platform for recombinant bacterial production of oxidized disulfide-rich proteins and peptides from animal venoms. High-throughput, host-optimized, gene synthesis and subcloning, combined with robust HTP expression and purification protocols, generate a semiautomated pipeline for the accelerated production of proteins and peptides identified from genomic or transcriptomic libraries. The platform has been applied to the production of thousands of animal venom peptide toxins for the purposes of drug discovery, but has the power to be universally applicable for high-level production of various and diverse target proteins in soluble form. This chapter details the HTP protocol for gene synthesis and production, which supported high levels of peptide expression in the E. coli periplasm using a cleavable DsbC fusion. Finally, target proteins and peptides are purified using automated HTP methods, before undergoing quality control and screening.

Keywords: Codon optimization; Cysteine-rich proteins; Disulfide bonds; DsbC; Gene synthesis; High-Throughput; PCR; PCR assembly; Protein production; Recombinant expression; Toxins; Venom peptides.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Disulfides / metabolism
  • Escherichia coli / genetics
  • Escherichia coli / metabolism*
  • Polymerase Chain Reaction
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Venoms / metabolism

Substances

  • Disulfides
  • Recombinant Fusion Proteins
  • Venoms