Differential expression profiles and functional analysis of circular RNAs in children with fulminant myocarditis

Epigenomics. 2019 Aug;11(10):1129-1141. doi: 10.2217/epi-2019-0101. Epub 2019 Jun 14.

Abstract

Aim: To assess differential expression profiles of circular RNAs (circRNAs) and explore their possible functions in children with fulminant myocarditis. Materials & methods: circRNA microarray experiments were carried out for determining differential expression profiles of circRNAs in three children with fulminant myocarditis and three healthy volunteers. Functional analysis and circRNA-miRNA-mRNA interaction network building were conducted to study biological functions. Results: This work identified 2281 upregulated and 892 downregulated circRNAs. Further assessment confirmed hsa_circ_0071542 upregulation (2.5-fold) in fulminant myocarditis. Functional analysis demonstrated the differentially expressed circRNAs mainly contributed to inflammation and immunity. Conclusion: circRNAs might have substantial roles in pediatric fulminant myocarditis, and hsa_circ_0071542 could serve as a promising biomarker.

Keywords: circular RNA; fulminant myocarditis; functional analysis; hsa_circ_0071542; microarray.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers / analysis*
  • Case-Control Studies
  • Child
  • Child, Preschool
  • Female
  • Follow-Up Studies
  • Gene Expression Regulation*
  • Gene Regulatory Networks*
  • Humans
  • Infant
  • Male
  • MicroRNAs / genetics*
  • Myocarditis / genetics*
  • Myocarditis / pathology
  • Prognosis
  • RNA, Circular / genetics*
  • RNA, Messenger / genetics*
  • Transcriptome

Substances

  • Biomarkers
  • MicroRNAs
  • RNA, Circular
  • RNA, Messenger