Structural insights to heterodimeric cis-prenyltransferases through yeast dehydrodolichyl diphosphate synthase subunit Nus1

Biochem Biophys Res Commun. 2019 Aug 6;515(4):621-626. doi: 10.1016/j.bbrc.2019.05.135. Epub 2019 Jun 6.

Abstract

The polyprenoid glycan carriers are produced by cis-prenyltransferases (cis-PTs), which function as heterodimers in metazoa and fungi or homodimers in bacteria, but both are found in plants, protista and archaea. Heterodimeric cis-PTs comprise catalytic and non-catalytic subunits while homodimeric enzymes contain two catalytic subunits. The non-catalytic subunits of cis-PT shows low sequence similarity to known cis-PTs and their structure information is of great interests. Here we report the crystal structure of Nus1, the non-catalytic subunit of cis-PT from Saccharomyces cerevisiae. We also investigate the heterodimer formation and active site conformation by constructing a homology model of Nus1 and its catalytic subunit. Nus1 does not contain an active site, but its C-terminus may participate in catalysis by interacting with the substrates bound to the catalytic subunit. These results provide important basis for further investigation of heterodimeric cis-PTs.

Keywords: Homology modeling; Isoprenoid; Nus1; X-ray crystallography; cis-prenyltransferase.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alkyl and Aryl Transferases / chemistry*
  • Catalysis
  • Catalytic Domain
  • Dimethylallyltranstransferase / chemistry*
  • Protein Binding
  • Protein Multimerization
  • Saccharomyces cerevisiae / enzymology*
  • Saccharomyces cerevisiae Proteins / chemistry*

Substances

  • Saccharomyces cerevisiae Proteins
  • Alkyl and Aryl Transferases
  • dehydrodolichyl diphosphate synthetase
  • Dimethylallyltranstransferase
  • RER2 protein, S cerevisiae
  • Nus1 protein, S cerevisiae