Inhibition of Pantothenate Synthetase by Analogs of β-Alanine Precursor Ineffective as an Antibacterial Strategy

Chemotherapy. 2019;64(1):22-27. doi: 10.1159/000499899. Epub 2019 Jun 5.

Abstract

Background: Pantothenate, the fundamental precursor to coenzyme A, is required for optimal growth and virulence of microbial pathogens. It is synthesized by the enzyme-catalyzed condensation of β-alanine and pantoate, which has shown susceptibility to inhibition by analogs of its molecular constituents. Accordingly, analogs of β-alanine are gaining inquiry as potential antimicrobial chemotherapeutics.

Methods: We synthesized and evaluated 35 derivatives of β-alanine, substituted at the α, β, amine, and carboxyl sites, derived from in silico, dynamic molecular modeling to be potential competitive inhibitors of pantothenate synthetase. Employing the Clinical Laboratory Standards M7-A6 broth microdilution method, we tested these for inhibition of growth in Escherichia coli, Staphylococcus aureus, and Pseudomonas aeruginosa.

Results: All compounds proved entirely ineffective in all species tested, with no inhibition of growth being observed up to 200 µM/mL.

Conclusions: Upon revision of the literature, we conclude that high enzyme selectivity or external salvage mechanisms may render this strategy futile against most bacteria.

Keywords: Antibacterial activity; Antimicrobial targets; Pantothenate; Pantothenate synthetase; β-Alanine.

MeSH terms

  • Bacterial Proteins / antagonists & inhibitors
  • Bacterial Proteins / metabolism*
  • Binding Sites
  • Escherichia coli / drug effects
  • Escherichia coli / enzymology
  • Escherichia coli / growth & development
  • Molecular Docking Simulation
  • Peptide Synthases / antagonists & inhibitors
  • Peptide Synthases / metabolism*
  • Protein Structure, Tertiary
  • Pseudomonas aeruginosa / drug effects
  • Pseudomonas aeruginosa / growth & development
  • Staphylococcus aureus / drug effects
  • Staphylococcus aureus / growth & development
  • beta-Alanine / analogs & derivatives
  • beta-Alanine / metabolism*
  • beta-Alanine / pharmacology

Substances

  • Bacterial Proteins
  • beta-Alanine
  • Peptide Synthases
  • pantothenate synthetase