Peroxiredoxin 1 post-transcriptionally regulates snoRNA expression

Free Radic Biol Med. 2019 Sep:141:1-9. doi: 10.1016/j.freeradbiomed.2019.05.030. Epub 2019 May 31.

Abstract

Peroxiredoxin 1 (Prx1) is a member of the Prx family that detoxifies various peroxide substrates through conserved catalytic cysteine residues with the use of reducing equivalents. In addition to this well-known role of Prx1, we have previously demonstrated that Prx1 also has RNA-binding properties, but its function as an RNA-binding protein (RBP) remains unknown. To characterize the role of Prx1 as an RBP, we pulled down Prx1-RNA complexes and sequenced the target RNAs of Prx1. Through sequencing and further validation studies, we revealed that Prx1 binds to a specific subset of small nucleolar RNAs (snoRNAs) and regulates these molecules at the post-transcriptional level. We also found that active cysteine residues provide a structural and functional link between these two distinct functions of Prx1 (i.e., ROS scavenging and RNA-binding activities). Prx1 functions as a snoRNA-binding protein in its reduced state, and post-transcriptionally regulates the expression of a set of snoRNAs. However, when the active cysteine residues are oxidized, Prx1 loses its activity as a snoRNA-binding protein. This study is the first report describing the novel role of Prx1 as a post-transcriptional regulator of snoRNAs.

Keywords: Peroxiredoxin1; Post-transcriptional regulation; Protein-RNA interaction; RNA-binding protein; Small nucleolar RNA.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Cysteine / chemistry
  • Gene Expression Regulation*
  • Gene Silencing
  • HeLa Cells
  • Hep G2 Cells
  • High-Throughput Nucleotide Sequencing
  • Homeodomain Proteins / metabolism*
  • Humans
  • Oxidative Stress
  • Protein Binding
  • Protein Domains
  • RNA Processing, Post-Transcriptional*
  • RNA, Small Nucleolar / metabolism*
  • Reactive Oxygen Species / metabolism

Substances

  • Homeodomain Proteins
  • PRRX1 protein, human
  • RNA, Small Nucleolar
  • Reactive Oxygen Species
  • Cysteine