Mutations in the Rice OsCHR4 Gene, Encoding a CHD3 Family Chromatin Remodeler, Induce Narrow and Rolled Leaves with Increased Cuticular Wax

Int J Mol Sci. 2019 May 25;20(10):2567. doi: 10.3390/ijms20102567.

Abstract

Leaf blade width, curvature, and cuticular wax are important agronomic traits of rice. Here, we report the rice Oschr4-5 mutant characterized by pleiotropic phenotypes, including narrow and rolled leaves, enhanced cuticular wax deposition and reduced plant height and tiller number. The reduced leaf width is caused by a reduced number of longitudinal veins and increased auxin content. The cuticular wax content was significantly higher in the Oschr4-5 mutant, resulting in reduced water loss rate and enhanced drought tolerance. Molecular characterization reveals that a single-base deletion results in a frame-shift mutation from the second chromodomain of OsCHR4, a CHD3 (chromodomain helicase DNA-binding) family chromatin remodeler, in the Oschr4-5 mutant. Expressions of seven wax biosynthesis genes (GL1-4, WSL4, OsCER7, LACS2, LACS7, ROC4 and BDG) and four auxin biosynthesis genes (YUC2, YUC3, YUC5 and YUC6) was up-regulated in the Oschr4-5 mutant. Chromatin immunoprecipitation assays revealed that the transcriptionally active histone modification H3K4me3 was increased, whereas the repressive H3K27me3 was reduced in the upregulated genes in the Oschr4-5 mutant. Therefore, OsCHR4 regulates leaf morphogenesis and cuticle wax formation by epigenetic modulation of auxin and wax biosynthetic genes expression.

Keywords: OsCHR4; auxin; chromatin remodeling factor; cuticular wax; drought tolerance; epigenetic regulation; histone modification; leaf width; narrow leaf; rice.

MeSH terms

  • Chromatin Assembly and Disassembly
  • DNA Helicases / genetics*
  • Droughts
  • Epigenesis, Genetic
  • Frameshift Mutation
  • Gene Expression Regulation, Plant*
  • Oryza / genetics*
  • Oryza / physiology
  • Oryza / ultrastructure
  • Phenotype
  • Plant Leaves / genetics
  • Plant Leaves / physiology
  • Plant Leaves / ultrastructure
  • Plant Proteins / genetics*
  • Plants, Genetically Modified / genetics*
  • Plants, Genetically Modified / physiology
  • Plants, Genetically Modified / ultrastructure
  • Stress, Physiological
  • Waxes / analysis
  • Waxes / metabolism

Substances

  • Plant Proteins
  • Waxes
  • DNA Helicases