LncRNA FOXD1-AS1 acts as a potential oncogenic biomarker in glioma

CNS Neurosci Ther. 2020 Jan;26(1):66-75. doi: 10.1111/cns.13152. Epub 2019 May 17.

Abstract

Aims: Altered activities of long noncoding RNAs (lncRNAs) have been associated with cancer development, and lncRNA FOXD1-AS1 (FOXD1-AS1) is the antisense transcript of the gene encoding for FOXD1, known for its role as an oncogene in several tumor types including glioma. However, the role of FOXD1-AS1 in the differentiation and progression of glioma is not well known.

Methods: Expression profile chip and qPCR were used to screen and identify FOXD1-AS1. Glioma cells were transfected with siRNA or eukaryotic expression vector to observe FOXD1-AS1 function in vitro and in vivo. Dual luciferase reporter gene analysis, Western blot, and ChIRP-MS were used to detect microRNAs and protein that combine with FOXD1-AS1.

Results: FOXD1-AS1 was upregulated and directly correlated with the glioma grade, and it was localized in both the nucleus and the cytoplasm of the glioma cell. FOXD1-AS1 silencing caused tumor suppressive effects via inhibiting cell proliferation, migration, and apoptosis, while FOXD1-AS1 overexpression resulted in opposite effects. Additionally, in vivo experiments showed that FOXD1-AS1 knockdown reduced tumor volume and weight. More importantly, mechanical studies revealed that FOXD1-AS1 targeted both miR339-5p and miR342-3p (miR339/342). Furthermore, protein eukaryotic translation initiation factor 5 subunit A (eIF5a) resulted a direct target of FOXD1-AS1.

Conclusions: These data indicated that FOXD1-AS1, a miR339/342 target, affected biological processes via protein eIF5a; thus, it might be considered as a new therapeutic target for glioblastoma.

Keywords: eIF5a; glioma; lncRNA FOXD1-AS1; lncRNAs; miR-339/342.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Apoptosis
  • Biomarkers / analysis
  • Brain Neoplasms / genetics*
  • Cell Line, Tumor
  • Diagnosis, Differential
  • Eukaryotic Translation Initiation Factor 5A
  • Forkhead Transcription Factors / genetics*
  • Glioma / genetics*
  • Mice
  • Mice, Inbred BALB C
  • MicroRNAs / genetics
  • Peptide Initiation Factors / genetics
  • Protein Array Analysis
  • RNA, Long Noncoding / genetics*
  • RNA, Small Interfering / genetics
  • RNA-Binding Proteins / genetics
  • Xenograft Model Antitumor Assays

Substances

  • Biomarkers
  • Forkhead Transcription Factors
  • Foxd1 protein, mouse
  • MIRN-339 microRNA, mouse
  • MicroRNAs
  • Mirn342 microRNA, mouse
  • Peptide Initiation Factors
  • RNA, Long Noncoding
  • RNA, Small Interfering
  • RNA-Binding Proteins