DRB1, DRB2 and DRB4 Are Required for Appropriate Regulation of the microRNA399/ PHOSPHATE2 Expression Module in Arabidopsis thaliana

Joseph L Pegler; Jackson M J Oultram; Christopher P L Grof; Andrew L Eamens

doi:10.3390/plants8050124

DRB1, DRB2 and DRB4 Are Required for Appropriate Regulation of the microRNA399/ PHOSPHATE2 Expression Module in Arabidopsis thaliana

Plants (Basel). 2019 May 13;8(5):124. doi: 10.3390/plants8050124.

Authors

Joseph L Pegler¹, Jackson M J Oultram², Christopher P L Grof³, Andrew L Eamens⁴

Affiliations

¹ Centre for Plant Science, School of Environmental and Life Sciences, Faculty of Science, University of Newcastle, Callaghan 2308, New South Wales, Australia. Joseph.Pegler@uon.edu.au.
² Centre for Plant Science, School of Environmental and Life Sciences, Faculty of Science, University of Newcastle, Callaghan 2308, New South Wales, Australia. Jackson.Oultram@uon.edu.au.
³ Centre for Plant Science, School of Environmental and Life Sciences, Faculty of Science, University of Newcastle, Callaghan 2308, New South Wales, Australia. chris.grof@newcastle.edu.au.
⁴ Centre for Plant Science, School of Environmental and Life Sciences, Faculty of Science, University of Newcastle, Callaghan 2308, New South Wales, Australia. andy.eamens@newcastle.edu.au.

Abstract

Adequate phosphorous (P) is essential to plant cells to ensure normal plant growth and development. Therefore, plants employ elegant mechanisms to regulate P abundance across their developmentally distinct tissues. One such mechanism is PHOSPHATE2 (PHO2)-directed ubiquitin-mediated degradation of a cohort of phosphate (PO₄) transporters. PHO2 is itself under tight regulation by the PO₄ responsive microRNA (miRNA), miR399. The DOUBLE-STRANDED RNA BINDING (DRB) proteins, DRB1, DRB2 and DRB4, have each been assigned a specific functional role in the Arabidopsis thaliana (Arabidopsis) miRNA pathway. Here, we assessed the requirement of DRB1, DRB2 and DRB4 to regulate the miR399/PHO2 expression module under PO₄ starvations conditions. Via the phenotypic and molecular assessment of the knockout mutant plant lines, drb1, drb2 and drb4, we show here that; (1) DRB1 and DRB2 are required to maintain P homeostasis in Arabidopsis shoot and root tissues; (2) DRB1 is the primary DRB required for miR399 production; (3) DRB2 and DRB4 play secondary roles in regulating miR399 production, and; (4) miR399 appears to direct expression regulation of the PHO2 transcript via both an mRNA cleavage and translational repression mode of RNA silencing. Together, the hierarchical contribution of DRB1, DRB2 and DRB4 demonstrated here to be required for the appropriate regulation of the miR399/PHO2 expression module identifies the extreme importance of P homeostasis maintenance in Arabidopsis to ensure that numerous vital cellular processes are maintained across Arabidopsis tissues under a changing cellular environment.

Keywords: Arabidopsis thaliana; DOUBLE-STRANDED RNA BINDING (DRB) proteins DRB1; DRB2; DRB4; PHOSPHATE2 (PHO2); RT-qPCR; miR399; miR399-directed PHO2 expression regulation; microRNA (miRNA); phosphate (PO4) stress; phosphorous (P).