Forensic molecular biomarkers for mixture analysis

Forensic Sci Int Genet. 2019 Jul:41:107-119. doi: 10.1016/j.fsigen.2019.04.003. Epub 2019 Apr 30.

Abstract

The deconvolution of DNA mixtures has gathered the attention of forensic DNA scientists for over two decades. To enhance mixture deconvolution capabilities, a new generation of sensitive DNA-typing approaches has been recently proposed. In this review, we describe novel, forensically relevant multi-SNP loci (i.e., microhaplotypes or microhaps), compound markers (i.e., DIP-STRs, SNP-STRs and DIP-SNPs) and lineage markers (i.e., rapidly mutating Y chromosome STRs) that improve the deconvolution of two and more than two-person mixtures typed using conventional STR, binary and non-binary loci. We explore the features and applications of these emerging molecular biomarkers with respect to their ability to forensically detect same-or-opposite sex donors. Finally, we discuss the impact of initial massively parallel sequencing (MPS) investigations of STR, microhaplotype and SNP/indel assays for DNA mixture profiling.

Keywords: Autosomal STR; Capillary electrophoresis; Compound markers; DIP-SNP; DIP-STR; Forensic mixture profiling; Genetic markers; Indel/DIP; Massively parallel sequencing; Microhaplotype; Rapidly mutating Y-STR; SNP; SNP-STR; Y-STR.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.
  • Review

MeSH terms

  • Chromosomes, Human, Y
  • DNA / genetics*
  • DNA Fingerprinting / methods*
  • Electrophoresis, Capillary
  • Genetic Markers*
  • Haplotypes
  • High-Throughput Nucleotide Sequencing
  • Humans
  • INDEL Mutation
  • Microsatellite Repeats
  • Polymerase Chain Reaction
  • Polymorphism, Single Nucleotide
  • Sequence Analysis, DNA

Substances

  • Genetic Markers
  • DNA