Importance of tyrosine in the RNA-binding domain of human parainfluenza virus type 2 nucleoprotein for polymerase activity

Arch Virol. 2019 Jul;164(7):1851-1855. doi: 10.1007/s00705-019-04240-x. Epub 2019 May 4.

Abstract

The RNA genome of human parainfluenza virus type 2 (hPIV2) is encapsidated by nucleoprotein (NP) to act as a template for RNA synthesis. We examined the importance of individual amino acids in the RNA-binding domain of hPIV2 NP for polymerase activity using a mini-replicon assay. We showed that substitution of tyrosine at amino acid position 260, located in the RNA-binding pocket of NP, severely reduced polymerase activity. The aromatic side-chain of Y260 may be required for the formation of stable contacts between nucleotides and basic amino acids, thereby affecting promoter recognition by the viral polymerase.

MeSH terms

  • Amino Acid Sequence
  • Crystallography, X-Ray
  • Genome, Viral / genetics
  • Humans
  • Nucleoproteins / genetics*
  • Parainfluenza Virus 2, Human / genetics*
  • RNA, Viral / metabolism*
  • RNA-Binding Motifs / genetics*
  • RNA-Dependent RNA Polymerase / metabolism*
  • Tyrosine / genetics
  • Virus Replication / genetics

Substances

  • Nucleoproteins
  • RNA, Viral
  • Tyrosine
  • RNA-Dependent RNA Polymerase

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