Molecular markers based on sequence variation in BoFLC1.C9 for characterizing early- and late-flowering cabbage genotypes

BMC Genet. 2019 Apr 27;20(1):42. doi: 10.1186/s12863-019-0740-1.

Abstract

Background: Cabbage (Brassica oleracea var. capitata) is popular worldwide for consumption as a leafy vegetable. Premature flowering is triggered by low temperature, and deteriorates quality of cabbage as vegetable. In general, growers prefer late-flowering varieties to assure good quality compact head. Here, we report BoFLC1.C9 as a gene with clear sequence variation between cabbage lines with different flowering times, and proposed as molecular marker to characterize early- and late-flowering cabbage lines.

Results: We identified sequence variation of 67 bp insertions in intron 2, which were contributed in flowering time variation between two inbred lines through rapid down-regulation of the BoFLC1.C9 gene in early-flowering line compared to late-flowering one upon vernalization. One set of primer 'F7R7' proposed as marker, of which was explained with 83 and 80% of flowering time variation in 141 F2 individuals and 20 commercial lines, respectively.

Conclusions: This F7R7 marker could be used as genetic tools to characterize flowering time variation and to select as well to develop early- and late-flowering cabbage cultivars.

Keywords: Cabbage; Early- and late-flowering; F7R7 marker; FLC.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Brassica / classification
  • Brassica / genetics*
  • Flowers / genetics*
  • Gene Expression Regulation, Plant
  • Genes, Plant*
  • Genetic Variation*
  • Genotype*
  • Introns
  • Phylogeny
  • Plant Development / genetics*
  • Polymorphism, Genetic