A thermostable chitinase from the antagonistic Chromobacterium violaceum that inhibits the development of phytopathogenic fungi

Enzyme Microb Technol. 2019 Jul:126:50-61. doi: 10.1016/j.enzmictec.2019.03.009. Epub 2019 Apr 1.

Abstract

The biocontrol activity of some soil strains of Chromobacterium sp. against pathogenic fungi has been attributed to secreted chitinases. The aim of this work was to characterize biochemically a recombinant chitinase (CvChi47) from C. violaceum ATCC 12472 and to investigate its effects on phytopathogenic fungi. CvChi47 is a modular enzyme with 450 amino acid residues, containing a type I signal peptide at the N-terminal region, followed by one catalytic domain belonging to family 18 of the glycoside hydrolases, and two type-3 chitin-binding domains at the C-terminal end. The recombinant enzyme was expressed in Escherichia coli as a His-tagged protein and purified to homogeneity. The native signal peptide of CvChi47 was used to direct its secretion into the culture medium, from where the recombinant product was purified by affinity chromatography on chitin and immobilized metal. The purified protein showed an apparent molecular mass of 46 kDa, as estimated by denaturing polyacrylamide gel electrophoresis, indicating the removal of the signal peptide. CvChi47 was a thermostable protein, retaining approximately 53.7% of its activity when heated at 100 °C for 1 h. The optimum hydrolytic activity was observed at 60 °C and pH 5. The recombinant chitinase inhibited the conidia germination of the phytopathogenic fungi Fusarium oxysporum and F. guttiforme, hence preventing mycelial growth. Furthermore, atomic force microscopy experiments revealed a pronounced morphological alteration of the cell surface of conidia incubated with CvChi47 in comparison to untreated cells. Taken together, these results show the potential of CvChi47 as a molecular tool to control plant diseases caused by these Fusarium species.

Keywords: Antifungal activity; Chitin; Glycoside hydrolase; Heterologous expression; Recombinant protein; Signal peptide.

MeSH terms

  • Amino Acid Sequence
  • Antifungal Agents / pharmacology*
  • Catalytic Domain
  • Chitinases / chemistry
  • Chitinases / genetics
  • Chitinases / metabolism*
  • Chromobacterium / enzymology*
  • Cloning, Molecular
  • Enzyme Stability
  • Fusarium / drug effects
  • Fusarium / growth & development*
  • Plant Diseases / microbiology
  • Plant Diseases / prevention & control*
  • Protein Conformation
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / genetics
  • Recombinant Proteins / metabolism*
  • Sequence Homology
  • Spores, Fungal / drug effects
  • Spores, Fungal / growth & development
  • Temperature

Substances

  • Antifungal Agents
  • Recombinant Proteins
  • Chitinases