Extreme value analysis of gut microbial alterations in colorectal cancer

Phys Rev E. 2019 Mar;99(3-1):032413. doi: 10.1103/PhysRevE.99.032413.

Abstract

Gut microbes play a key role in colorectal carcinogenesis, yet reaching a consensus on microbial signatures remains a challenge. This is in part due to a reliance on mean value estimates. We present an extreme value analysis for overcoming these limitations. By characterizing a power-law fit to the relative abundances of microbes, we capture the same microbial signatures as more complex meta-analyses. Importantly, we show that our method is robust to the variations inherent in microbial community profiling and point to future directions for developing sensitive, reliable analytical methods.

MeSH terms

  • Adenoma / microbiology
  • Biodiversity
  • Colorectal Neoplasms / microbiology*
  • Gastrointestinal Microbiome*
  • Humans
  • Models, Biological*