Identification of the gene cluster for bistropolone-humulene meroterpenoid biosynthesis in Phoma sp

Fungal Genet Biol. 2019 Aug:129:7-15. doi: 10.1016/j.fgb.2019.04.004. Epub 2019 Apr 10.

Abstract

Eupenifeldin, a bistropolone meroterpenoid, was first discovered as an antitumor agent from the fungus Eupenicillium brefeldianum. We also isolated this compound and a new congener from a strain of Phoma sp. (CGMCC 10481), and evaluated their antitumor effects. Eupenifeldin showed potent in vitro anti-glioma activity. This tropolone-humulene-tropolone meroterpenoid could be originated from two units of tropolone orthoquinone methides and a 10-hydroxyhumulene moiety via hetero-Diels-Alder reactions. To explore the biosynthesis of this class of tropolonic sesquiterpenes, the genome of a eupenifeldin-producing Phoma sp. was sequenced and analyzed. The biosynthetic gene cluster of eupenifeldin (eup) was identified and partially validated by genomic analysis, gene disruption, and product analysis. A nonreducing polyketide synthase EupA, a FAD-dependent monooxygenase EupB, and a non-heme Fe (II)-dependent dioxygenase EupC, were identified as the enzymes responsible for tropolone formation. While the terpene cyclase EupE of an unknown family was characterized to catalyze humulene formation, and a cytochrome P450 enzyme EupD was responsible for hydroxylation of humulene. This study sheds light on the biosynthesis of eupenifeldin, and paves the way to further decipher its biosynthetic pathway.

Keywords: Biosynthetic gene cluster; Eupenifeldin; Humulenol; Phoma sp.; Tropolonic sesquiterpene.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Ascomycota / enzymology*
  • Ascomycota / genetics*
  • Biosynthetic Pathways
  • Genome, Fungal
  • Hydroxylation
  • Mixed Function Oxygenases / genetics
  • Monocyclic Sesquiterpenes / metabolism
  • Multigene Family*
  • Polyketide Synthases / genetics
  • Sequence Analysis, DNA
  • Tropolone / analogs & derivatives*
  • Tropolone / metabolism

Substances

  • Monocyclic Sesquiterpenes
  • eupenifeldin
  • humulene
  • Polyketide Synthases
  • Tropolone
  • Mixed Function Oxygenases