Filtration-histogram based magnetic resonance texture analysis (MRTA) for glioma IDH and 1p19q genotyping

Eur J Radiol. 2019 Apr:113:116-123. doi: 10.1016/j.ejrad.2019.02.014. Epub 2019 Feb 13.

Abstract

Background: To determine if filtration-histogram based texture analysis (MRTA) of clinical MR imaging can non-invasively identify molecular subtypes of untreated gliomas.

Methods: Post Gadolinium T1-weighted (T1+Gad) images, T2-weighted (T2) images and apparent diffusion coefficient (ADC) maps of 97 gliomas (54 = WHO II, 20 = WHO III, 23 = WHO IV) between 2010 and 2016 were studied. Whole-tumor segmentations were performed on a proprietary texture analysis research platform (TexRAD, Cambridge, UK) using the software's freehand drawing tool. MRTA commences with a filtration step, followed by quantification of texture using histogram texture parameters. Results were correlated using non-parametric statistics with a logistic regression model generated.

Results: T1+Gad performed best for IDH typing of glioblastoma (sensitivity 91.9%, specificity 100%, AUC 0.945) and ADC for non-Gadolinium-enhancing gliomas (sensitivity 85.7%, specificity 78.4%, AUC 0.877). T2 was moderately precise (sensitivity 83.1%, specificity 78.9%, AUC 0.821). Excellent results for IDH typing were achieved from a combination of the three sequences (sensitivity 90.5%, specificity 94.5%, AUC = 0.98). For discriminating 1p19q genotypes, ADC produced the best results using unfiltered textures (sensitivity 80.6%, specificity 89.3%, AUC 0.811).

Conclusion: Preoperative glioma genotyping with MRTA appears valuable with potential for clinical translation. The optimal choice of texture parameters is influenced by sequence choice, tumour morphology and segmentation method.

Keywords: 1p19q codeletion; Brain tumour; Glioma; Isocitrate dehydrogenase; Texture analysis.

Publication types

  • Evaluation Study

MeSH terms

  • Adult
  • Aged
  • Brain Neoplasms / genetics
  • Brain Neoplasms / pathology*
  • Contrast Media
  • Diffusion Magnetic Resonance Imaging / methods
  • Female
  • Gadolinium
  • Genotype
  • Genotyping Techniques
  • Glioblastoma / genetics
  • Glioblastoma / pathology
  • Glioma / genetics
  • Glioma / pathology*
  • Humans
  • Magnetic Resonance Spectroscopy
  • Male
  • Middle Aged
  • Neoplasm Grading
  • Retrospective Studies
  • Sensitivity and Specificity
  • Software

Substances

  • Contrast Media
  • Gadolinium