Liver segmentation from low-radiation-dose pediatric computed tomography using patient-specific, statistical modeling

Int J Comput Assist Radiol Surg. 2019 Dec;14(12):2057-2068. doi: 10.1007/s11548-019-01929-x. Epub 2019 Mar 14.

Abstract

Purpose: The pediatric computed tomography (CT) volume is acquired at a low dose because radiation is harmful to young children. Consequently, the pediatric CT volume has lower signal-to-noise ratio, which makes organ segmentation difficult. In this paper, we propose a liver segmentation algorithm for pediatric CT scan using a patient-specific level set distribution model (LSDM).

Methods: The patient-specific LSDM was constructed using a conditional LSDM (C-LSDM) conditioned on age. Furthermore, a patient-specific probabilistic atlas (PA) was generated using the model, which became a priori to the maximum a posteriori-based segmentation. The patient-specific PA generation by the C-LSDM using kernel density estimation was quicker than the conventional PA generation method using random numbers, and also, it was more accurate as it did not include any approximations.

Results: The liver segmentation algorithm was tested on 42 CT volumes of children aged between 2 weeks and 7 years. In the proposed method, the calculation time of the PA was about 9 s for the single Gaussian method, while it was 337 s for the conventional PA generation method using random numbers. Furthermore, using the kernel density estimation, median and 25%/75% tile of the generalized Dice similarity index between the PA and the correct liver region were found to be 0.3443 and 0.3191/0.3595. The Dice similarity index in the segmentation was 0.8821 and 0.8545/0.9085, which are higher than those obtained by the conventional method, and requires lower computational cost.

Conclusion: We proposed a method to quickly and accurately generate a PA, combined with C-LSDM using kernel density estimation, which enabled efficient calculation and improved segmentation accuracy.

Keywords: Computed tomography; Conditional statistical shape model; Liver segmentation; Patient-specific probabilistic atlas; Pediatrics.

MeSH terms

  • Algorithms
  • Child
  • Child, Preschool
  • Humans
  • Image Processing, Computer-Assisted / methods*
  • Infant
  • Infant, Newborn
  • Liver / diagnostic imaging*
  • Patient-Specific Modeling*
  • Tomography, X-Ray Computed / methods*