SOX2 promoter hypermethylation in non-smoking Taiwanese adults residing in air pollution areas

Clin Epigenetics. 2019 Mar 12;11(1):46. doi: 10.1186/s13148-019-0647-8.

Abstract

Background: Both SOX2 promoter methylation and air pollution have been associated with lung cancer risk. However, little has been done to assess SOX2 promoter methylation in individuals living in air pollution areas. The aim of this study was to investigate SOX2 promoter methylation in non-smoking Taiwanese adults living in areas with different levels of air pollution especially particulate matter with diameter < 2.5 μm (PM2.5).

Methods: A total of 1142 individuals aged 30-70 years were recruited. Data on SOX2 methylation, residence, age, and exposure to second-hand smoke (SHS) among others were extracted from the Taiwan Biobank dataset (2008-2015). After excluding former and current smokers, alongside those with incomplete information, a total of 461 non-smokers comprising 176 men and 285 women were included in the study. Participants' residences were grouped under northern and central/southern areas because air pollution (PM2.5) is lower in northern compared to central and southern areas.

Results: The methylation levels in men (0.16310 ± 0.01230) and women (0.15740 ± 0.01240) were significantly different (P < .0001). In both sexes, the SOX2 promoter region was shown to be significantly hypermethylated in central and southern areas compared with the northern areas. The regression coefficient (β) was 0.00331 (P = 0.0257) in men and 0.00514 (P < .0001) in women.

Conclusion: SOX2 was significantly hypermethylated in both men and women residing in central and southern areas. The consistency in the results for both sexes shows that SOX2 promoter methylation could serve as a potential biomarker for industrial air pollution exposure. Moreover, it might reflect predisposition to cancer. Hence, healthy non-smokers at precancerous stages who have not been clinically diagnosed could be identified.

Keywords: Air pollution; Biomarker; Hypermethylation; Non-smoking; SOX2; Taiwan Biobank.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adult
  • Aged
  • Air Pollution / adverse effects
  • Air Pollution / analysis
  • DNA Methylation* / drug effects
  • Female
  • Humans
  • Male
  • Middle Aged
  • Promoter Regions, Genetic / drug effects
  • Regression Analysis
  • SOXB1 Transcription Factors / genetics*
  • Taiwan
  • Tobacco Smoke Pollution / adverse effects
  • Tobacco Smoke Pollution / analysis*

Substances

  • SOX2 protein, human
  • SOXB1 Transcription Factors
  • Tobacco Smoke Pollution