Replication Study: The microRNA miR-34a inhibits prostate cancer stem cells and metastasis by directly repressing CD44

Elife. 2019 Mar 12:8:e43511. doi: 10.7554/eLife.43511.

Abstract

As part of the Reproducibility Project: Cancer Biology, we published a Registered Report (Li et al., 2015), that described how we intended to replicate selected experiments from the paper 'The microRNA miR-34a inhibits prostate cancer stem cells and metastasis by directly repressing CD44' (Liu et al., 2011). Here we report the results. We found the microRNA, miR-34a, was expressed at twice the level in CD44+ prostate cancer cells purified from xenograft tumors (LAPC4 cells) compared to CD44- LAPC4 cells, whereas the original study reported miR-34a was underexpressed in CD44+ LAPC4 cells (Figure 1B; Liu et al., 2011). When LAPC4 cells engineered to express miR-34a were injected into mice, we did not observe changes in tumor growth or CD44 expression; however, unexpectedly miR-34a expression was lost in vivo. In the original study, LAPC4 cells expressing miR-34a had a statistically significant reduction in tumor regeneration and reduced CD44 expression compared to control (Figure 4A and Supplemental Figures 4A,B and 5C; Liu et al., 2011). Furthermore, when we tested if miR-34a regulated CD44 through binding sites in the 3'UTR we did not find a statistically significant difference, whereas the original study reported miR-34a decreased CD44 expression that was partially abrogated by mutation of the binding sites in the CD44 3'UTR (Figure 4D; Liu et al., 2011). Finally, where possible, we report meta-analyses for each result.

Keywords: LAPC4; Reproducibility Project: Cancer Biology; cancer biology; human; metascience; metastasis; miR-34a; mouse; replication.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • 3' Untranslated Regions
  • Alleles
  • Animals
  • Binding Sites
  • Cell Line
  • Cell Line, Tumor
  • Cell Separation
  • Flow Cytometry
  • Gene Expression Regulation, Neoplastic
  • HEK293 Cells
  • Humans
  • Hyaluronan Receptors / genetics*
  • Male
  • Mice
  • Mice, Inbred NOD
  • Mice, SCID
  • MicroRNAs / genetics*
  • Neoplasm Metastasis*
  • Neoplasm Transplantation
  • Neoplastic Stem Cells / metabolism*
  • Prostatic Neoplasms / genetics*
  • Prostatic Neoplasms / metabolism
  • Reproducibility of Results

Substances

  • 3' Untranslated Regions
  • CD44 protein, human
  • Hyaluronan Receptors
  • MIRN34 microRNA, human
  • MicroRNAs

Grants and funding

The Reproducibility Project: Cancer Biology is funded by the Laura and John Arnold Foundation, provided to the Center for Open Science in collaboration with Science Exchange. The funder had no role in study design, data collection and interpretation, or the decision to submit the work for publication.