Inhibition of ricin A-chain (RTA) catalytic activity by a viral genome-linked protein (VPg)

Biochim Biophys Acta Proteins Proteom. 2019 Jun;1867(6):645-653. doi: 10.1016/j.bbapap.2019.02.002. Epub 2019 Feb 27.

Abstract

Ricin is a plant derived protein toxin produced by the castor bean plant (Ricinus communis). The Centers for Disease Control (CDC) classifies ricin as a Category B biological agent. Currently, there is neither an effective vaccine that can be used to protect against ricin exposure nor a therapeutic to reverse the effects once exposed. Here we quantitatively characterize interactions between catalytic ricin A-chain (RTA) and a viral genome-linked protein (VPg) from turnip mosaic virus (TuMV). VPg and its N-terminal truncated variant, VPg1-110, bind to RTA and abolish ricin's catalytic depurination of 28S rRNA in vitro and in a cell-free rabbit reticulocyte translational system. RTA and VPg bind in a 1 to 1 stoichiometric ratio, and their binding affinity increases ten-fold as temperature elevates (5 °C to 37 °C). RTA-VPg binary complex formation is enthalpically driven and favored by entropy, resulting in an overall favorable energy, ΔG = -136.8 kJ/mol. Molecular modeling supports our experimental observations and predicts a major contribution of electrostatic interactions, suggesting an allosteric mechanism of downregulation of RTA activity through conformational changes in RTA structure, and/or disruption of binding with the ribosomal stalk. Fluorescence anisotropy studies show that heat affects the rate constant and the activation energy for the RTA-VPg complex, Ea = -62.1 kJ/mol. The thermodynamic and kinetic findings presented here are an initial lead study with promising results and provides a rational approach for synthesis of therapeutic peptides that successfully eliminate toxicity of ricin, and other cytotoxic RIPs.

Keywords: Depurination; Fluorescence; Genome-linked viral protein (VPg); Protein-protein interactions; Ribosome inactivating protein (RIP); Ricin A-chain (RTA).

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Cell-Free System
  • Models, Molecular
  • Potyvirus / metabolism*
  • Protein Binding
  • RNA, Ribosomal, 28S / chemistry
  • Rabbits
  • Reticulocytes / chemistry
  • Reticulocytes / drug effects
  • Ricin / antagonists & inhibitors*
  • Ricin / toxicity
  • Ricinus / metabolism*
  • Sequence Deletion
  • Thermodynamics
  • Viral Proteins / chemistry
  • Viral Proteins / genetics
  • Viral Proteins / pharmacology*

Substances

  • RNA, Ribosomal, 28S
  • Viral Proteins
  • Ricin

Supplementary concepts

  • Turnip mosaic virus