Genetic screen for factors mediating PIN polarization in gravistimulated Arabidopsis thaliana hypocotyls

Plant J. 2019 Jun;98(6):1048-1059. doi: 10.1111/tpj.14301. Epub 2019 Apr 10.

Abstract

Gravitropism is an adaptive response that orients plant growth parallel to the gravity vector. Asymmetric distribution of the phytohormone auxin is a necessary prerequisite to the tropic bending both in roots and shoots. During hypocotyl gravitropic response, the PIN3 auxin transporter polarizes within gravity-sensing cells to redirect intercellular auxin fluxes. First gravity-induced PIN3 polarization to the bottom cell membranes leads to the auxin accumulation at the lower side of the organ, initiating bending and, later, auxin feedback-mediated repolarization restores symmetric auxin distribution to terminate bending. Here, we performed a forward genetic screen to identify regulators of both PIN3 polarization events during gravitropic response. We searched for mutants with defective PIN3 polarizations based on easy-to-score morphological outputs of decreased or increased gravity-induced hypocotyl bending. We identified the number of hypocotyl reduced bending (hrb) and hypocotyl hyperbending (hhb) mutants, revealing that reduced bending correlated typically with defective gravity-induced PIN3 relocation whereas all analyzed hhb mutants showed defects in the second, auxin-mediated PIN3 relocation. Next-generation sequencing-aided mutation mapping identified several candidate genes, including SCARECROW and ACTIN2, revealing roles of endodermis specification and actin cytoskeleton in the respective gravity- and auxin-induced PIN polarization events. The hypocotyl gravitropism screen thus promises to provide novel insights into mechanisms underlying cell polarity and plant adaptive development.

Keywords: SCARECROW; Arabidopsis thaliana; PIN proteins; actin cytoskeleton.; auxin transport; cell polarity; forward genetic screen; gravitropism.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Actin Cytoskeleton / metabolism
  • Arabidopsis / genetics*
  • Arabidopsis / physiology
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Cell Polarity
  • Gravitropism*
  • Gravity Sensing
  • Hypocotyl / genetics
  • Hypocotyl / physiology
  • Indoleacetic Acids / metabolism*
  • Mutation
  • Plant Growth Regulators / metabolism*
  • Plant Roots / genetics
  • Plant Roots / physiology
  • Protein Transport

Substances

  • Arabidopsis Proteins
  • Indoleacetic Acids
  • PIN3 protein, Arabidopsis
  • Plant Growth Regulators
  • SCR protein, Arabidopsis